Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
HPS1Q92902 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.2□□□□□ -0.14
HPS1Q92902 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
HPS1Q92902 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.2□□□□□ -0.14
HPS1Q92902 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.2□□□□□ -0.14
HPS1Q92902 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.2□□□□□ -0.14
HPS1Q92902 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.2□□□□□ -0.14
HPS1Q92902 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC14.2□□□□□ -0.14
HPS1Q92902 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HPS1Q92902 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.2□□□□□ -0.14
HPS1Q92902 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.2□□□□□ -0.14
HPS1Q92902 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.2□□□□□ -0.14
HPS1Q92902 FAM86C2P-203ENST00000528684 1004 ntBASIC14.2□□□□□ -0.14
HPS1Q92902 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.2□□□□□ -0.14
HPS1Q92902 AC013467.2-201ENST00000605472 835 ntBASIC14.2□□□□□ -0.14
HPS1Q92902 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.2□□□□□ -0.14
HPS1Q92902 AC105339.1-204ENST00000636249 355 ntBASIC14.2□□□□□ -0.14
HPS1Q92902 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
HPS1Q92902 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.2□□□□□ -0.14
HPS1Q92902 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HPS1Q92902 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HPS1Q92902 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.2□□□□□ -0.14
HPS1Q92902 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HPS1Q92902 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.2□□□□□ -0.14
HPS1Q92902 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.2□□□□□ -0.14
HPS1Q92902 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HPS1Q92902 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HPS1Q92902 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HPS1Q92902 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.19□□□□□ -0.14
HPS1Q92902 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HPS1Q92902 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HPS1Q92902 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.19□□□□□ -0.14
HPS1Q92902 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.19□□□□□ -0.14
HPS1Q92902 LINC00895-201ENST00000629028 1637 ntBASIC14.19□□□□□ -0.14
HPS1Q92902 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
HPS1Q92902 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
HPS1Q92902 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
HPS1Q92902 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HPS1Q92902 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HPS1Q92902 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
HPS1Q92902 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.19□□□□□ -0.14
HPS1Q92902 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HPS1Q92902 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HPS1Q92902 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HPS1Q92902 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HPS1Q92902 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HPS1Q92902 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HPS1Q92902 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.19□□□□□ -0.14
HPS1Q92902 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.19□□□□□ -0.14
HPS1Q92902 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.19□□□□□ -0.14
HPS1Q92902 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
HPS1Q92902 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.19□□□□□ -0.14
HPS1Q92902 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
HPS1Q92902 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.19□□□□□ -0.14
HPS1Q92902 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC14.19□□□□□ -0.14
HPS1Q92902 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HPS1Q92902 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC14.19□□□□□ -0.14
HPS1Q92902 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HPS1Q92902 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
HPS1Q92902 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HPS1Q92902 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.19□□□□□ -0.14
HPS1Q92902 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
HPS1Q92902 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HPS1Q92902 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HPS1Q92902 AC092919.2-201ENST00000623631 1645 ntBASIC14.19□□□□□ -0.14
HPS1Q92902 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HPS1Q92902 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HPS1Q92902 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.19□□□□□ -0.14
HPS1Q92902 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.19□□□□□ -0.14
HPS1Q92902 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.19□□□□□ -0.14
HPS1Q92902 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.19□□□□□ -0.14
HPS1Q92902 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms