Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
AP3S1Q92572 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
AP3S1Q92572 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.57□□□□□ -0.24
AP3S1Q92572 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
AP3S1Q92572 PPT1-213ENST00000641319 2388 ntBASIC13.57□□□□□ -0.24
AP3S1Q92572 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.57□□□□□ -0.24
AP3S1Q92572 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
AP3S1Q92572 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
AP3S1Q92572 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.56□□□□□ -0.24
AP3S1Q92572 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
AP3S1Q92572 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.56□□□□□ -0.24
AP3S1Q92572 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.56□□□□□ -0.24
AP3S1Q92572 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.56□□□□□ -0.24
AP3S1Q92572 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.56□□□□□ -0.24
AP3S1Q92572 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
AP3S1Q92572 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 FGFR3P6-201ENST00000457012 610 ntBASIC13.56□□□□□ -0.24
AP3S1Q92572 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.56□□□□□ -0.24
AP3S1Q92572 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.56□□□□□ -0.24
AP3S1Q92572 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.56□□□□□ -0.24
AP3S1Q92572 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.56□□□□□ -0.24
AP3S1Q92572 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.56□□□□□ -0.24
AP3S1Q92572 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.56□□□□□ -0.24
AP3S1Q92572 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.56□□□□□ -0.24
AP3S1Q92572 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
AP3S1Q92572 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
AP3S1Q92572 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
AP3S1Q92572 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.56□□□□□ -0.24
AP3S1Q92572 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.56□□□□□ -0.24
AP3S1Q92572 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
AP3S1Q92572 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.56□□□□□ -0.24
AP3S1Q92572 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
AP3S1Q92572 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.56□□□□□ -0.24
AP3S1Q92572 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
AP3S1Q92572 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
AP3S1Q92572 AC027612.1-201ENST00000445234 2395 ntBASIC13.56□□□□□ -0.24
AP3S1Q92572 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP3S1Q92572 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S1Q92572 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
AP3S1Q92572 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S1Q92572 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S1Q92572 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S1Q92572 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S1Q92572 AC012508.2-201ENST00000567613 1472 ntBASIC13.55□□□□□ -0.24
AP3S1Q92572 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
AP3S1Q92572 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S1Q92572 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
AP3S1Q92572 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
AP3S1Q92572 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S1Q92572 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.55□□□□□ -0.24
AP3S1Q92572 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
AP3S1Q92572 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
AP3S1Q92572 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S1Q92572 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
AP3S1Q92572 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.55□□□□□ -0.24
AP3S1Q92572 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
AP3S1Q92572 AC073621.1-201ENST00000392730 636 ntBASIC13.55□□□□□ -0.24
AP3S1Q92572 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S1Q92572 AC092474.2-201ENST00000424288 719 ntBASIC13.55□□□□□ -0.24
AP3S1Q92572 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.55□□□□□ -0.24
AP3S1Q92572 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
AP3S1Q92572 MIR3180-1-201ENST00000580374 94 ntBASIC13.55□□□□□ -0.24
AP3S1Q92572 AC061975.2-201ENST00000581722 295 ntBASIC13.55□□□□□ -0.24
AP3S1Q92572 MIR3180-3-201ENST00000584616 94 ntBASIC13.55□□□□□ -0.24
AP3S1Q92572 AC008608.2-201ENST00000606089 416 ntBASIC13.55□□□□□ -0.24
AP3S1Q92572 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.55□□□□□ -0.24
AP3S1Q92572 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.55□□□□□ -0.24
AP3S1Q92572 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.55□□□□□ -0.24
AP3S1Q92572 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.55□□□□□ -0.24
AP3S1Q92572 AC116407.4-201ENST00000623319 1061 ntBASIC13.55□□□□□ -0.24
AP3S1Q92572 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S1Q92572 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S1Q92572 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms