Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 MRPS18AP1-201ENST00000414458 589 ntBASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 MEP1AP4-201ENST00000423244 1087 ntBASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 CYMP-203ENST00000474680 1263 ntBASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 DOC2GP-202ENST00000514950 1163 ntBASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 AL391069.4-201ENST00000609583 481 ntBASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 AC091951.1-201ENST00000512854 2465 ntBASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 ZBED1P1-201ENST00000502364 1930 ntBASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 AC012508.2-201ENST00000567613 1472 ntBASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 FAM45BP-202ENST00000592932 1624 ntBASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 AC104581.4-201ENST00000623126 3052 ntBASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 AL589987.1-201ENST00000453380 819 ntBASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 SPDYE18-201ENST00000510091 1050 ntBASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TTC9CQ8N5M4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms