Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 AC025048.3-201ENST00000590609 569 ntBASIC15.72■□□□□ 0.11
CASC4Q6P4E1 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 AC005702.4-201ENST00000618393 416 ntBASIC15.72■□□□□ 0.11
CASC4Q6P4E1 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 Z97205.2-201ENST00000564697 1639 ntBASIC15.72■□□□□ 0.11
CASC4Q6P4E1 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CASC4Q6P4E1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 CNN2P2-201ENST00000443536 909 ntBASIC15.71■□□□□ 0.11
CASC4Q6P4E1 CNN2P3-201ENST00000450201 906 ntBASIC15.71■□□□□ 0.11
CASC4Q6P4E1 RN7SL618P-201ENST00000477850 296 ntBASIC15.71■□□□□ 0.11
CASC4Q6P4E1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 AC109322.1-201ENST00000524499 1264 ntBASIC15.71■□□□□ 0.11
CASC4Q6P4E1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 AC015910.1-201ENST00000579400 975 ntBASIC15.71■□□□□ 0.11
CASC4Q6P4E1 SPDYE12P-201ENST00000618416 771 ntBASIC15.71■□□□□ 0.11
CASC4Q6P4E1 AL136317.3-201ENST00000618497 906 ntBASIC15.71■□□□□ 0.11
CASC4Q6P4E1 AF228730.6-201ENST00000641497 218 ntBASIC15.71■□□□□ 0.11
CASC4Q6P4E1 AC084121.3-201ENST00000641716 218 ntBASIC15.71■□□□□ 0.11
CASC4Q6P4E1 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CASC4Q6P4E1 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms