Protein–RNA interactions for Protein: Q6P1Q0

LETMD1, LETM1 domain-containing protein 1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1Q6P1Q0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 LILRP1-201ENST00000444199 1370 ntBASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 AL157414.3-201ENST00000624276 1954 ntBASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LETMD1Q6P1Q0 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LETMD1Q6P1Q0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.83□□□□□ -0.03
LETMD1Q6P1Q0 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
LETMD1Q6P1Q0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.83□□□□□ -0.03
LETMD1Q6P1Q0 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LETMD1Q6P1Q0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.83□□□□□ -0.03
LETMD1Q6P1Q0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.83□□□□□ -0.03
LETMD1Q6P1Q0 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
LETMD1Q6P1Q0 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LETMD1Q6P1Q0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
LETMD1Q6P1Q0 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LETMD1Q6P1Q0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
LETMD1Q6P1Q0 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LETMD1Q6P1Q0 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 INTS4P1-203ENST00000641008 3683 ntBASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 MEIS3P1-201ENST00000495167 958 ntBASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 GAPDHP40-201ENST00000505218 1006 ntBASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 AC004840.1-201ENST00000636359 365 ntBASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 AC018442.1-201ENST00000421439 2061 ntBASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LETMD1Q6P1Q0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 AC135586.1-201ENST00000539323 574 ntBASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 AC004790.1-201ENST00000612686 536 ntBASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 AC139530.3-201ENST00000620344 690 ntBASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LETMD1Q6P1Q0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms