Protein–RNA interactions for Protein: Q53TQ3

INO80D, INO80 complex subunit D, humanhuman

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
INO80DQ53TQ3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
INO80DQ53TQ3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.54■□□□□ 0.08
INO80DQ53TQ3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
INO80DQ53TQ3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
INO80DQ53TQ3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
INO80DQ53TQ3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 KRT43P-201ENST00000434019 910 ntBASIC15.53■□□□□ 0.08
INO80DQ53TQ3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 AC073347.1-201ENST00000421633 2643 ntBASIC15.53■□□□□ 0.08
INO80DQ53TQ3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
INO80DQ53TQ3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 AC018665.1-201ENST00000622927 1362 ntBASIC15.52■□□□□ 0.08
INO80DQ53TQ3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 AC092384.3-202ENST00000564646 2873 ntBASIC15.52■□□□□ 0.08
INO80DQ53TQ3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 AC092933.1-201ENST00000393644 945 ntBASIC15.52■□□□□ 0.08
INO80DQ53TQ3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
INO80DQ53TQ3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
INO80DQ53TQ3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
INO80DQ53TQ3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
INO80DQ53TQ3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.52■□□□□ 0.07
INO80DQ53TQ3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
INO80DQ53TQ3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
INO80DQ53TQ3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
INO80DQ53TQ3 AC013268.4-201ENST00000637413 2228 ntBASIC15.52■□□□□ 0.07
INO80DQ53TQ3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
INO80DQ53TQ3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms