Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN20Q4JDL3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.1■□□□□ 0.17
PTPN20Q4JDL3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 RPSAP52-203ENST00000622976 1023 ntBASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 CU634019.7-201ENST00000624153 1185 ntBASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 FP236241.2-201ENST00000624906 1185 ntBASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 LINC01101-201ENST00000622953 1884 ntBASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 AL137783.1-201ENST00000623494 1896 ntBASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTPN20Q4JDL3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTPN20Q4JDL3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PTPN20Q4JDL3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTPN20Q4JDL3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.08■□□□□ 0.17
PTPN20Q4JDL3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTPN20Q4JDL3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTPN20Q4JDL3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTPN20Q4JDL3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
PTPN20Q4JDL3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTPN20Q4JDL3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTPN20Q4JDL3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.08■□□□□ 0.17
PTPN20Q4JDL3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 AL139094.1-201ENST00000405549 1188 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms