Protein–RNA interactions for Protein: Q3B7S5

SMIM21, Small integral membrane protein 21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM21Q3B7S5 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM21Q3B7S5 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM21Q3B7S5 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM21Q3B7S5 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM21Q3B7S5 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM21Q3B7S5 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.01□□□□□ -0.33
SMIM21Q3B7S5 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM21Q3B7S5 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM21Q3B7S5 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM21Q3B7S5 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM21Q3B7S5 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM21Q3B7S5 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SMIM21Q3B7S5 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM21Q3B7S5 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM21Q3B7S5 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 ZBTB45P1-201ENST00000452761 1456 ntBASIC13□□□□□ -0.33
SMIM21Q3B7S5 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 FAM86LP-201ENST00000478302 853 ntBASIC13□□□□□ -0.33
SMIM21Q3B7S5 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 AL391069.4-201ENST00000609583 481 ntBASIC13□□□□□ -0.33
SMIM21Q3B7S5 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM21Q3B7S5 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13□□□□□ -0.33
SMIM21Q3B7S5 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 CLK3P2-201ENST00000427566 1453 ntBASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 AC104596.2-201ENST00000512793 793 ntBASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM21Q3B7S5 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms