Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 AC007191.1-201ENST00000623179 2995 ntBASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 MIR4745-201ENST00000577608 62 ntBASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO1Q2MKA7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 PIN1P1-201ENST00000412108 996 ntBASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RSPO1Q2MKA7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms