Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.02■□□□□ -0
CDK3Q00526 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.02■□□□□ -0
CDK3Q00526 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDK3Q00526 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDK3Q00526 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDK3Q00526 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDK3Q00526 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.02■□□□□ -0
CDK3Q00526 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDK3Q00526 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.02■□□□□ -0
CDK3Q00526 PPT1-215ENST00000641471 2368 ntBASIC15.02■□□□□ -0
CDK3Q00526 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDK3Q00526 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.02■□□□□ -0
CDK3Q00526 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDK3Q00526 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDK3Q00526 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.02■□□□□ -0
CDK3Q00526 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.02■□□□□ -0
CDK3Q00526 CD8B2-202ENST00000417670 633 ntBASIC15.02■□□□□ -0
CDK3Q00526 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDK3Q00526 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDK3Q00526 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.02■□□□□ -0
CDK3Q00526 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.02■□□□□ -0
CDK3Q00526 AC245100.3-201ENST00000441281 285 ntBASIC15.02■□□□□ -0
CDK3Q00526 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.02■□□□□ -0
CDK3Q00526 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.02■□□□□ -0
CDK3Q00526 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.02■□□□□ -0
CDK3Q00526 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CDK3Q00526 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.02■□□□□ -0
CDK3Q00526 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDK3Q00526 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.02■□□□□ -0
CDK3Q00526 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.02■□□□□ -0
CDK3Q00526 AC006453.4-201ENST00000636949 1252 ntBASIC15.02■□□□□ -0
CDK3Q00526 AL033527.4-201ENST00000641026 673 ntBASIC15.02■□□□□ -0
CDK3Q00526 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CDK3Q00526 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDK3Q00526 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CDK3Q00526 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CDK3Q00526 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.02□□□□□ -0.01
CDK3Q00526 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDK3Q00526 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CDK3Q00526 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDK3Q00526 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDK3Q00526 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDK3Q00526 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDK3Q00526 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDK3Q00526 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.02□□□□□ -0.01
CDK3Q00526 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CDK3Q00526 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.01□□□□□ -0.01
CDK3Q00526 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CDK3Q00526 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CDK3Q00526 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 AL162727.3-201ENST00000635661 2787 ntBASIC15.01□□□□□ -0.01
CDK3Q00526 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CDK3Q00526 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CDK3Q00526 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.01□□□□□ -0.01
CDK3Q00526 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CDK3Q00526 FAM21FP-201ENST00000426241 1131 ntBASIC15.01□□□□□ -0.01
CDK3Q00526 YBX1P6-201ENST00000442962 1002 ntBASIC15.01□□□□□ -0.01
CDK3Q00526 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 RNA5SP412-201ENST00000516234 123 ntBASIC15.01□□□□□ -0.01
CDK3Q00526 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.01□□□□□ -0.01
CDK3Q00526 AC023310.1-201ENST00000554836 735 ntBASIC15.01□□□□□ -0.01
CDK3Q00526 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.01□□□□□ -0.01
CDK3Q00526 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.01□□□□□ -0.01
CDK3Q00526 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.01□□□□□ -0.01
CDK3Q00526 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 MROH4P-201ENST00000431302 1578 ntBASIC15.01□□□□□ -0.01
CDK3Q00526 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CDK3Q00526 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.01□□□□□ -0.01
CDK3Q00526 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CDK3Q00526 AP000845.1-201ENST00000581677 2131 ntBASIC15.01□□□□□ -0.01
CDK3Q00526 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDK3Q00526 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CDK3Q00526 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDK3Q00526 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDK3Q00526 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDK3Q00526 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CDK3Q00526 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDK3Q00526 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms