Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.69□□□□□ -0.38
SRPXP78539 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SRPXP78539 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SRPXP78539 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
SRPXP78539 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SRPXP78539 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
SRPXP78539 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SRPXP78539 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SRPXP78539 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SRPXP78539 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.69□□□□□ -0.38
SRPXP78539 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SRPXP78539 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.69□□□□□ -0.38
SRPXP78539 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.69□□□□□ -0.38
SRPXP78539 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SRPXP78539 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.69□□□□□ -0.38
SRPXP78539 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SRPXP78539 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SRPXP78539 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SRPXP78539 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SRPXP78539 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SRPXP78539 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SRPXP78539 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SRPXP78539 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.68□□□□□ -0.38
SRPXP78539 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SRPXP78539 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SRPXP78539 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SRPXP78539 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
SRPXP78539 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.68□□□□□ -0.38
SRPXP78539 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.68□□□□□ -0.38
SRPXP78539 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
SRPXP78539 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.68□□□□□ -0.38
SRPXP78539 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
SRPXP78539 AC131212.3-201ENST00000624087 4219 ntBASIC12.68□□□□□ -0.38
SRPXP78539 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.68□□□□□ -0.38
SRPXP78539 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.68□□□□□ -0.38
SRPXP78539 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 FAM86C2P-203ENST00000528684 1004 ntBASIC12.68□□□□□ -0.38
SRPXP78539 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.68□□□□□ -0.38
SRPXP78539 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
SRPXP78539 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.68□□□□□ -0.38
SRPXP78539 AC018529.2-202ENST00000611482 3087 ntBASIC12.68□□□□□ -0.38
SRPXP78539 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
SRPXP78539 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 AC055811.4-201ENST00000624039 1754 ntBASIC12.68□□□□□ -0.38
SRPXP78539 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.68□□□□□ -0.38
SRPXP78539 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.68□□□□□ -0.38
SRPXP78539 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
SRPXP78539 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SRPXP78539 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SRPXP78539 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SRPXP78539 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SRPXP78539 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SRPXP78539 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
SRPXP78539 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SRPXP78539 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SRPXP78539 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SRPXP78539 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SRPXP78539 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SRPXP78539 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.67□□□□□ -0.38
SRPXP78539 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SRPXP78539 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.67□□□□□ -0.38
SRPXP78539 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.67□□□□□ -0.38
SRPXP78539 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.67□□□□□ -0.38
SRPXP78539 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SRPXP78539 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.67□□□□□ -0.38
SRPXP78539 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SRPXP78539 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SRPXP78539 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SRPXP78539 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.67□□□□□ -0.38
SRPXP78539 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
SRPXP78539 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SRPXP78539 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SRPXP78539 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SRPXP78539 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SRPXP78539 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SRPXP78539 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms