Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMGA2P52926 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HMGA2P52926 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
HMGA2P52926 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
HMGA2P52926 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMGA2P52926 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMGA2P52926 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.99□□□□□ -0.17
HMGA2P52926 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HMGA2P52926 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMGA2P52926 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HMGA2P52926 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMGA2P52926 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.98□□□□□ -0.17
HMGA2P52926 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HMGA2P52926 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMGA2P52926 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
HMGA2P52926 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HMGA2P52926 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HMGA2P52926 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.98□□□□□ -0.17
HMGA2P52926 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HMGA2P52926 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
HMGA2P52926 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.98□□□□□ -0.17
HMGA2P52926 NFIC-211ENST00000641145 8399 ntBASIC13.98□□□□□ -0.17
HMGA2P52926 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMGA2P52926 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMGA2P52926 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMGA2P52926 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMGA2P52926 MIR574-201ENST00000385209 96 ntBASIC13.98□□□□□ -0.17
HMGA2P52926 MIR940-201ENST00000401276 94 ntBASIC13.98□□□□□ -0.17
HMGA2P52926 SPDYE7P-202ENST00000420373 878 ntBASIC13.98□□□□□ -0.17
HMGA2P52926 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.98□□□□□ -0.17
HMGA2P52926 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
HMGA2P52926 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.98□□□□□ -0.17
HMGA2P52926 AC004066.1-201ENST00000502488 802 ntBASIC13.98□□□□□ -0.17
HMGA2P52926 AP000344.2-201ENST00000512987 629 ntBASIC13.98□□□□□ -0.17
HMGA2P52926 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.98□□□□□ -0.17
HMGA2P52926 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.98□□□□□ -0.17
HMGA2P52926 AL512356.2-201ENST00000546955 174 ntBASIC13.98□□□□□ -0.17
HMGA2P52926 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMGA2P52926 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
HMGA2P52926 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.98□□□□□ -0.17
HMGA2P52926 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HMGA2P52926 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.98□□□□□ -0.17
HMGA2P52926 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMGA2P52926 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMGA2P52926 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.98□□□□□ -0.17
HMGA2P52926 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMGA2P52926 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMGA2P52926 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMGA2P52926 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
HMGA2P52926 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HMGA2P52926 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HMGA2P52926 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMGA2P52926 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMGA2P52926 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.98□□□□□ -0.17
HMGA2P52926 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.98□□□□□ -0.17
HMGA2P52926 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
HMGA2P52926 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HMGA2P52926 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.98□□□□□ -0.17
HMGA2P52926 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HMGA2P52926 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HMGA2P52926 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HMGA2P52926 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.97□□□□□ -0.17
HMGA2P52926 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HMGA2P52926 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HMGA2P52926 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMGA2P52926 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.97□□□□□ -0.17
HMGA2P52926 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.97□□□□□ -0.17
HMGA2P52926 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMGA2P52926 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMGA2P52926 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.97□□□□□ -0.17
HMGA2P52926 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMGA2P52926 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
HMGA2P52926 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HMGA2P52926 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMGA2P52926 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.97□□□□□ -0.17
HMGA2P52926 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.97□□□□□ -0.17
HMGA2P52926 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
HMGA2P52926 GAPDHP40-201ENST00000505218 1006 ntBASIC13.97□□□□□ -0.17
HMGA2P52926 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.97□□□□□ -0.17
HMGA2P52926 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.97□□□□□ -0.17
HMGA2P52926 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.97□□□□□ -0.17
HMGA2P52926 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.97□□□□□ -0.17
HMGA2P52926 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.97□□□□□ -0.17
HMGA2P52926 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMGA2P52926 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HMGA2P52926 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HMGA2P52926 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HMGA2P52926 MBLAC2-202ENST00000514906 1936 ntBASIC13.97□□□□□ -0.17
HMGA2P52926 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMGA2P52926 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.97□□□□□ -0.17
HMGA2P52926 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMGA2P52926 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HMGA2P52926 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.97□□□□□ -0.17
HMGA2P52926 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HMGA2P52926 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.97□□□□□ -0.17
HMGA2P52926 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HMGA2P52926 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.97□□□□□ -0.17
HMGA2P52926 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HMGA2P52926 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.97□□□□□ -0.17
HMGA2P52926 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms