Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC9.81□□□□□ -0.84
UBE2AP49459 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 RAC2-202ENST00000401529 569 ntTSL 4 BASIC9.81□□□□□ -0.84
UBE2AP49459 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC9.81□□□□□ -0.84
UBE2AP49459 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC9.81□□□□□ -0.84
UBE2AP49459 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC9.81□□□□□ -0.84
UBE2AP49459 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC9.81□□□□□ -0.84
UBE2AP49459 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC9.81□□□□□ -0.84
UBE2AP49459 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
UBE2AP49459 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC9.81□□□□□ -0.84
UBE2AP49459 AC105021.1-202ENST00000570572 669 ntBASIC9.81□□□□□ -0.84
UBE2AP49459 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC9.81□□□□□ -0.84
UBE2AP49459 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC9.81□□□□□ -0.84
UBE2AP49459 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
UBE2AP49459 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
UBE2AP49459 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
UBE2AP49459 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC9.81□□□□□ -0.84
UBE2AP49459 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
UBE2AP49459 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC9.81□□□□□ -0.84
UBE2AP49459 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
UBE2AP49459 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBE2AP49459 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC9.8□□□□□ -0.84
UBE2AP49459 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
UBE2AP49459 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2AP49459 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC9.8□□□□□ -0.84
UBE2AP49459 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC9.8□□□□□ -0.84
UBE2AP49459 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC9.8□□□□□ -0.84
UBE2AP49459 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
UBE2AP49459 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2AP49459 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2AP49459 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
UBE2AP49459 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC9.8□□□□□ -0.84
UBE2AP49459 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
UBE2AP49459 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2AP49459 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2AP49459 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2AP49459 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
UBE2AP49459 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC9.8□□□□□ -0.84
UBE2AP49459 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2AP49459 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2AP49459 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2AP49459 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC9.8□□□□□ -0.84
UBE2AP49459 AL035456.1-201ENST00000456064 1369 ntBASIC9.8□□□□□ -0.84
UBE2AP49459 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2AP49459 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
UBE2AP49459 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2AP49459 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2AP49459 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2AP49459 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2AP49459 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2AP49459 TKT-202ENST00000423516 2075 ntTSL 2 BASIC9.8□□□□□ -0.84
UBE2AP49459 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2AP49459 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC9.8□□□□□ -0.84
UBE2AP49459 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2AP49459 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2AP49459 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2AP49459 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2AP49459 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC9.8□□□□□ -0.84
UBE2AP49459 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC9.8□□□□□ -0.84
UBE2AP49459 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC9.8□□□□□ -0.84
UBE2AP49459 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC9.8□□□□□ -0.84
UBE2AP49459 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC9.8□□□□□ -0.84
UBE2AP49459 COX10-202ENST00000429152 875 ntTSL 2 BASIC9.8□□□□□ -0.84
UBE2AP49459 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
UBE2AP49459 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC9.8□□□□□ -0.84
UBE2AP49459 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC9.8□□□□□ -0.84
UBE2AP49459 AC023141.5-201ENST00000458585 616 ntBASIC9.8□□□□□ -0.84
UBE2AP49459 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC9.8□□□□□ -0.84
UBE2AP49459 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC9.8□□□□□ -0.84
UBE2AP49459 DHDH-204ENST00000523250 634 ntTSL 5 BASIC9.8□□□□□ -0.84
UBE2AP49459 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC9.8□□□□□ -0.84
UBE2AP49459 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
UBE2AP49459 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC9.8□□□□□ -0.84
UBE2AP49459 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC9.8□□□□□ -0.84
UBE2AP49459 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms