Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNNI2P48788 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.11■□□□□ 0.49
TNNI2P48788 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.11■□□□□ 0.49
TNNI2P48788 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.11■□□□□ 0.49
TNNI2P48788 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.11■□□□□ 0.49
TNNI2P48788 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TNNI2P48788 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNNI2P48788 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNNI2P48788 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TNNI2P48788 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TNNI2P48788 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNNI2P48788 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNNI2P48788 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TNNI2P48788 NKAIN1P1-201ENST00000435754 582 ntBASIC18.11■□□□□ 0.49
TNNI2P48788 FTLP10-202ENST00000505798 471 ntBASIC18.11■□□□□ 0.49
TNNI2P48788 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC18.11■□□□□ 0.49
TNNI2P48788 AC105129.2-201ENST00000559536 390 ntBASIC18.11■□□□□ 0.49
TNNI2P48788 AC106820.3-201ENST00000561653 397 ntBASIC18.11■□□□□ 0.49
TNNI2P48788 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNNI2P48788 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNNI2P48788 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNNI2P48788 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNNI2P48788 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNNI2P48788 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.11■□□□□ 0.49
TNNI2P48788 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.11■□□□□ 0.49
TNNI2P48788 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNNI2P48788 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNNI2P48788 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNNI2P48788 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNNI2P48788 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNNI2P48788 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.1■□□□□ 0.49
TNNI2P48788 AL365203.3-201ENST00000609742 2057 ntBASIC18.1■□□□□ 0.49
TNNI2P48788 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.1■□□□□ 0.49
TNNI2P48788 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 AC127383.1-201ENST00000444697 1800 ntBASIC18.1■□□□□ 0.49
TNNI2P48788 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.1■□□□□ 0.49
TNNI2P48788 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.1■□□□□ 0.49
TNNI2P48788 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TNNI2P48788 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC18.1■□□□□ 0.49
TNNI2P48788 SMS-201ENST00000379404 1174 ntTSL 3 BASIC18.1■□□□□ 0.49
TNNI2P48788 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TNNI2P48788 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 AL136309.1-201ENST00000403917 691 ntBASIC18.1■□□□□ 0.49
TNNI2P48788 RPL5P21-201ENST00000404620 815 ntBASIC18.1■□□□□ 0.49
TNNI2P48788 AL354877.1-201ENST00000424412 413 ntBASIC18.1■□□□□ 0.49
TNNI2P48788 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.1■□□□□ 0.49
TNNI2P48788 HIST2H2BB-201ENST00000449108 381 ntBASIC18.1■□□□□ 0.49
TNNI2P48788 RN7SL769P-201ENST00000469386 295 ntBASIC18.1■□□□□ 0.49
TNNI2P48788 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC18.1■□□□□ 0.49
TNNI2P48788 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC18.1■□□□□ 0.49
TNNI2P48788 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.1■□□□□ 0.49
TNNI2P48788 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC18.1■□□□□ 0.49
TNNI2P48788 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC18.1■□□□□ 0.49
TNNI2P48788 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TNNI2P48788 CU633904.3-201ENST00000624042 1029 ntBASIC18.1■□□□□ 0.49
TNNI2P48788 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
TNNI2P48788 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TNNI2P48788 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TNNI2P48788 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
TNNI2P48788 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TNNI2P48788 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.1■□□□□ 0.49
TNNI2P48788 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TNNI2P48788 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNNI2P48788 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TNNI2P48788 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TNNI2P48788 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TNNI2P48788 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNNI2P48788 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNNI2P48788 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNNI2P48788 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNNI2P48788 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
TNNI2P48788 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
TNNI2P48788 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
TNNI2P48788 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
TNNI2P48788 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNNI2P48788 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.09■□□□□ 0.49
TNNI2P48788 CYP46A4P-201ENST00000414953 267 ntBASIC18.09■□□□□ 0.49
TNNI2P48788 CHMP1AP1-201ENST00000445563 662 ntBASIC18.09■□□□□ 0.49
TNNI2P48788 AL133466.1-201ENST00000447582 150 ntBASIC18.09■□□□□ 0.49
TNNI2P48788 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms