Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 FAM207CP-201ENST00000443486 507 ntBASIC13.69□□□□□ -0.22
CSNK1A1P48729 SPTLC1P1-201ENST00000447199 261 ntBASIC13.69□□□□□ -0.22
CSNK1A1P48729 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1A1P48729 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 SPCS2P1-201ENST00000561636 679 ntBASIC13.69□□□□□ -0.22
CSNK1A1P48729 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 AL049840.4-201ENST00000602422 811 ntBASIC13.69□□□□□ -0.22
CSNK1A1P48729 AL355385.1-201ENST00000606123 409 ntBASIC13.69□□□□□ -0.22
CSNK1A1P48729 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1A1P48729 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 MROH4P-201ENST00000431302 1578 ntBASIC13.69□□□□□ -0.22
CSNK1A1P48729 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1A1P48729 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1A1P48729 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1A1P48729 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1A1P48729 SLC7A15P-201ENST00000424028 1363 ntBASIC13.69□□□□□ -0.22
CSNK1A1P48729 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1A1P48729 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1A1P48729 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.68□□□□□ -0.22
CSNK1A1P48729 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CSNK1A1P48729 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
CSNK1A1P48729 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.68□□□□□ -0.22
CSNK1A1P48729 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CSNK1A1P48729 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.68□□□□□ -0.22
CSNK1A1P48729 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
CSNK1A1P48729 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CSNK1A1P48729 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.68□□□□□ -0.22
CSNK1A1P48729 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.68□□□□□ -0.22
CSNK1A1P48729 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CSNK1A1P48729 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.68□□□□□ -0.22
CSNK1A1P48729 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.68□□□□□ -0.22
CSNK1A1P48729 DFFBP1-201ENST00000433250 979 ntBASIC13.68□□□□□ -0.22
CSNK1A1P48729 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.68□□□□□ -0.22
CSNK1A1P48729 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.68□□□□□ -0.22
CSNK1A1P48729 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
CSNK1A1P48729 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CSNK1A1P48729 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CSNK1A1P48729 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.68□□□□□ -0.22
CSNK1A1P48729 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CSNK1A1P48729 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CSNK1A1P48729 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.68□□□□□ -0.22
CSNK1A1P48729 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CSNK1A1P48729 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.67□□□□□ -0.22
CSNK1A1P48729 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CSNK1A1P48729 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CSNK1A1P48729 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.67□□□□□ -0.22
CSNK1A1P48729 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.67□□□□□ -0.22
CSNK1A1P48729 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 AC004066.1-201ENST00000502488 802 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms