Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CBX5P45973 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
CBX5P45973 BEND3P1-201ENST00000421591 1944 ntBASIC13.31□□□□□ -0.28
CBX5P45973 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
CBX5P45973 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CBX5P45973 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
CBX5P45973 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.31□□□□□ -0.28
CBX5P45973 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CBX5P45973 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CBX5P45973 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.31□□□□□ -0.28
CBX5P45973 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
CBX5P45973 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
CBX5P45973 HCG4B-203ENST00000450128 991 ntBASIC13.31□□□□□ -0.28
CBX5P45973 AC105233.2-201ENST00000523697 349 ntBASIC13.31□□□□□ -0.28
CBX5P45973 AF228730.5-201ENST00000530288 346 ntBASIC13.31□□□□□ -0.28
CBX5P45973 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CBX5P45973 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CBX5P45973 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
CBX5P45973 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CBX5P45973 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.31□□□□□ -0.28
CBX5P45973 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.31□□□□□ -0.28
CBX5P45973 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.31□□□□□ -0.28
CBX5P45973 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.31□□□□□ -0.28
CBX5P45973 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CBX5P45973 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.31□□□□□ -0.28
CBX5P45973 AC010507.1-201ENST00000633895 436 ntBASIC13.31□□□□□ -0.28
CBX5P45973 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CBX5P45973 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
CBX5P45973 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 DNM1P41-201ENST00000623634 3350 ntBASIC13.31□□□□□ -0.28
CBX5P45973 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.31□□□□□ -0.28
CBX5P45973 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CBX5P45973 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.31□□□□□ -0.28
CBX5P45973 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.31□□□□□ -0.28
CBX5P45973 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CBX5P45973 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.31□□□□□ -0.28
CBX5P45973 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
CBX5P45973 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 KRT8P37-201ENST00000451609 1420 ntBASIC13.3□□□□□ -0.28
CBX5P45973 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CBX5P45973 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CBX5P45973 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CBX5P45973 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CBX5P45973 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CBX5P45973 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.3□□□□□ -0.28
CBX5P45973 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.3□□□□□ -0.28
CBX5P45973 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CBX5P45973 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.3□□□□□ -0.28
CBX5P45973 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CBX5P45973 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CBX5P45973 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
CBX5P45973 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
CBX5P45973 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 UPK3BP1-201ENST00000428678 509 ntBASIC13.3□□□□□ -0.28
CBX5P45973 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.3□□□□□ -0.28
CBX5P45973 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CBX5P45973 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.3□□□□□ -0.28
CBX5P45973 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
CBX5P45973 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.3□□□□□ -0.28
CBX5P45973 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CBX5P45973 IFNL4P1-201ENST00000607083 540 ntBASIC13.3□□□□□ -0.28
CBX5P45973 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms