Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MMP11P24347 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MMP11P24347 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
MMP11P24347 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.58□□□□□ -0.08
MMP11P24347 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
MMP11P24347 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
MMP11P24347 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.58□□□□□ -0.08
MMP11P24347 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.58□□□□□ -0.08
MMP11P24347 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
MMP11P24347 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.58□□□□□ -0.08
MMP11P24347 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.58□□□□□ -0.08
MMP11P24347 KRT223P-202ENST00000449164 1292 ntBASIC14.58□□□□□ -0.08
MMP11P24347 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.58□□□□□ -0.08
MMP11P24347 AC104989.1-201ENST00000519711 778 ntBASIC14.58□□□□□ -0.08
MMP11P24347 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.58□□□□□ -0.08
MMP11P24347 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
MMP11P24347 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.58□□□□□ -0.08
MMP11P24347 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.58□□□□□ -0.08
MMP11P24347 MIR6775-201ENST00000617557 69 ntBASIC14.58□□□□□ -0.08
MMP11P24347 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.58□□□□□ -0.08
MMP11P24347 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.58□□□□□ -0.08
MMP11P24347 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.58□□□□□ -0.08
MMP11P24347 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.58□□□□□ -0.08
MMP11P24347 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP11P24347 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
MMP11P24347 DRD5P1-201ENST00000456605 1438 ntBASIC14.58□□□□□ -0.08
MMP11P24347 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP11P24347 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.57□□□□□ -0.08
MMP11P24347 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.57□□□□□ -0.08
MMP11P24347 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP11P24347 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.57□□□□□ -0.08
MMP11P24347 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.57□□□□□ -0.08
MMP11P24347 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP11P24347 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.57□□□□□ -0.08
MMP11P24347 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
MMP11P24347 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP11P24347 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
MMP11P24347 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP11P24347 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
MMP11P24347 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
MMP11P24347 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP11P24347 AL355864.2-201ENST00000447420 863 ntBASIC14.57□□□□□ -0.08
MMP11P24347 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MMP11P24347 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MMP11P24347 AC119751.2-201ENST00000504529 210 ntBASIC14.57□□□□□ -0.08
MMP11P24347 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.57□□□□□ -0.08
MMP11P24347 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.57□□□□□ -0.08
MMP11P24347 CLUHP6-201ENST00000580789 941 ntBASIC14.57□□□□□ -0.08
MMP11P24347 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP11P24347 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.57□□□□□ -0.08
MMP11P24347 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
MMP11P24347 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.57□□□□□ -0.08
MMP11P24347 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.57□□□□□ -0.08
MMP11P24347 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.57□□□□□ -0.08
MMP11P24347 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.57□□□□□ -0.08
MMP11P24347 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP11P24347 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP11P24347 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP11P24347 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP11P24347 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
MMP11P24347 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.57□□□□□ -0.08
MMP11P24347 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
MMP11P24347 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
MMP11P24347 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MMP11P24347 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MMP11P24347 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP11P24347 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MMP11P24347 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
MMP11P24347 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.57□□□□□ -0.08
MMP11P24347 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP11P24347 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP11P24347 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.57□□□□□ -0.08
MMP11P24347 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MMP11P24347 NFIC-211ENST00000641145 8399 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms