Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC067750.1-201ENST00000608826 6545 ntBASIC14.55□□□□□ -0.08
NCK1P16333 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCK1P16333 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCK1P16333 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCK1P16333 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.55□□□□□ -0.08
NCK1P16333 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
NCK1P16333 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.55□□□□□ -0.08
NCK1P16333 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.55□□□□□ -0.08
NCK1P16333 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.55□□□□□ -0.08
NCK1P16333 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NCK1P16333 ADH5P3-201ENST00000433842 1137 ntBASIC14.55□□□□□ -0.08
NCK1P16333 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.55□□□□□ -0.08
NCK1P16333 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NCK1P16333 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.55□□□□□ -0.08
NCK1P16333 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.55□□□□□ -0.08
NCK1P16333 AC079140.1-201ENST00000508039 487 ntBASIC14.55□□□□□ -0.08
NCK1P16333 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.55□□□□□ -0.08
NCK1P16333 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.55□□□□□ -0.08
NCK1P16333 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NCK1P16333 AC092902.6-201ENST00000641783 218 ntBASIC14.55□□□□□ -0.08
NCK1P16333 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.55□□□□□ -0.08
NCK1P16333 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
NCK1P16333 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
NCK1P16333 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NCK1P16333 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCK1P16333 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCK1P16333 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCK1P16333 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.55□□□□□ -0.08
NCK1P16333 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCK1P16333 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCK1P16333 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
NCK1P16333 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NCK1P16333 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NCK1P16333 REXO1L4P-201ENST00000605109 1937 ntBASIC14.54□□□□□ -0.08
NCK1P16333 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NCK1P16333 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.54□□□□□ -0.08
NCK1P16333 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.54□□□□□ -0.08
NCK1P16333 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NCK1P16333 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NCK1P16333 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.54□□□□□ -0.08
NCK1P16333 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.54□□□□□ -0.08
NCK1P16333 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.54□□□□□ -0.08
NCK1P16333 FAM58CP-201ENST00000435741 640 ntBASIC14.54□□□□□ -0.08
NCK1P16333 SPDYE11-202ENST00000450699 704 ntBASIC14.54□□□□□ -0.08
NCK1P16333 AC009078.2-202ENST00000463353 338 ntBASIC14.54□□□□□ -0.08
NCK1P16333 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 RPL13AP23-201ENST00000480739 586 ntBASIC14.54□□□□□ -0.08
NCK1P16333 RN7SL589P-201ENST00000481268 310 ntBASIC14.54□□□□□ -0.08
NCK1P16333 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.54□□□□□ -0.08
NCK1P16333 IGHV3-62-201ENST00000520057 340 ntBASIC14.54□□□□□ -0.08
NCK1P16333 FAM86C2P-203ENST00000528684 1004 ntBASIC14.54□□□□□ -0.08
NCK1P16333 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 SLC25A39P2-201ENST00000537614 270 ntBASIC14.54□□□□□ -0.08
NCK1P16333 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.54□□□□□ -0.08
NCK1P16333 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.54□□□□□ -0.08
NCK1P16333 SPDYE9P-201ENST00000570642 692 ntBASIC14.54□□□□□ -0.08
NCK1P16333 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
NCK1P16333 SPDYE10P-202ENST00000612005 668 ntBASIC14.54□□□□□ -0.08
NCK1P16333 SPDYE8P-202ENST00000612377 668 ntBASIC14.54□□□□□ -0.08
NCK1P16333 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.54□□□□□ -0.08
NCK1P16333 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.54□□□□□ -0.08
NCK1P16333 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NCK1P16333 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.54□□□□□ -0.08
NCK1P16333 UXT-AS1-201ENST00000590504 1525 ntBASIC14.54□□□□□ -0.08
NCK1P16333 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NCK1P16333 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.54□□□□□ -0.08
NCK1P16333 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
NCK1P16333 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NCK1P16333 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.53□□□□□ -0.08
NCK1P16333 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms