Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLUP10909 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.9□□□□□ -0.18
CLUP10909 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLUP10909 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLUP10909 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLUP10909 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLUP10909 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLUP10909 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.9□□□□□ -0.18
CLUP10909 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLUP10909 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLUP10909 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.9□□□□□ -0.18
CLUP10909 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLUP10909 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.9□□□□□ -0.18
CLUP10909 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.9□□□□□ -0.18
CLUP10909 KRT18P64-201ENST00000434946 1219 ntBASIC13.9□□□□□ -0.18
CLUP10909 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLUP10909 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.9□□□□□ -0.18
CLUP10909 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.9□□□□□ -0.18
CLUP10909 AC026150.2-201ENST00000564693 1156 ntBASIC13.9□□□□□ -0.18
CLUP10909 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.9□□□□□ -0.18
CLUP10909 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.9□□□□□ -0.18
CLUP10909 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CLUP10909 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.9□□□□□ -0.18
CLUP10909 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.9□□□□□ -0.18
CLUP10909 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CLUP10909 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
CLUP10909 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLUP10909 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLUP10909 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.9□□□□□ -0.18
CLUP10909 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLUP10909 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLUP10909 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CLUP10909 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLUP10909 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLUP10909 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.9□□□□□ -0.18
CLUP10909 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLUP10909 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLUP10909 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.9□□□□□ -0.18
CLUP10909 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLUP10909 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CLUP10909 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.9□□□□□ -0.18
CLUP10909 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLUP10909 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.9□□□□□ -0.18
CLUP10909 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CLUP10909 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CLUP10909 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.89□□□□□ -0.19
CLUP10909 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.89□□□□□ -0.19
CLUP10909 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.89□□□□□ -0.19
CLUP10909 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CLUP10909 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
CLUP10909 KRT8P12-202ENST00000472924 1397 ntBASIC13.89□□□□□ -0.19
CLUP10909 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CLUP10909 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
CLUP10909 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.89□□□□□ -0.19
CLUP10909 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.89□□□□□ -0.19
CLUP10909 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.89□□□□□ -0.19
CLUP10909 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.89□□□□□ -0.19
CLUP10909 MIR4453-201ENST00000584019 89 ntBASIC13.89□□□□□ -0.19
CLUP10909 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 AC007967.4-201ENST00000614700 386 ntBASIC13.89□□□□□ -0.19
CLUP10909 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CLUP10909 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.89□□□□□ -0.19
CLUP10909 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.89□□□□□ -0.19
CLUP10909 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CLUP10909 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
CLUP10909 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.89□□□□□ -0.19
CLUP10909 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.89□□□□□ -0.19
CLUP10909 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.89□□□□□ -0.19
CLUP10909 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.89□□□□□ -0.19
CLUP10909 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CLUP10909 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.89□□□□□ -0.19
CLUP10909 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CLUP10909 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CLUP10909 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLUP10909 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
CLUP10909 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLUP10909 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms