Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CSF1P09603 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.36□□□□□ -0.27
CSF1P09603 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.36□□□□□ -0.27
CSF1P09603 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.36□□□□□ -0.27
CSF1P09603 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CSF1P09603 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.36□□□□□ -0.27
CSF1P09603 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.36□□□□□ -0.27
CSF1P09603 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSF1P09603 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSF1P09603 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSF1P09603 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSF1P09603 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CSF1P09603 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CSF1P09603 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.35□□□□□ -0.27
CSF1P09603 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
CSF1P09603 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.35□□□□□ -0.27
CSF1P09603 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.35□□□□□ -0.27
CSF1P09603 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CSF1P09603 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
CSF1P09603 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.35□□□□□ -0.27
CSF1P09603 AC092474.2-201ENST00000424288 719 ntBASIC13.35□□□□□ -0.27
CSF1P09603 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.35□□□□□ -0.27
CSF1P09603 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.35□□□□□ -0.27
CSF1P09603 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.35□□□□□ -0.27
CSF1P09603 CXCL1P1-201ENST00000502804 216 ntBASIC13.35□□□□□ -0.27
CSF1P09603 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.35□□□□□ -0.27
CSF1P09603 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.35□□□□□ -0.27
CSF1P09603 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.35□□□□□ -0.27
CSF1P09603 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.35□□□□□ -0.27
CSF1P09603 AC068137.2-201ENST00000605408 478 ntBASIC13.35□□□□□ -0.27
CSF1P09603 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CSF1P09603 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.35□□□□□ -0.27
CSF1P09603 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.35□□□□□ -0.27
CSF1P09603 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CSF1P09603 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CSF1P09603 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
CSF1P09603 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.35□□□□□ -0.27
CSF1P09603 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CSF1P09603 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CSF1P09603 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
CSF1P09603 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.34□□□□□ -0.27
CSF1P09603 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.34□□□□□ -0.27
CSF1P09603 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.34□□□□□ -0.27
CSF1P09603 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CSF1P09603 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CSF1P09603 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CSF1P09603 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.34□□□□□ -0.27
CSF1P09603 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.34□□□□□ -0.27
CSF1P09603 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
CSF1P09603 SPCS2P1-201ENST00000561636 679 ntBASIC13.34□□□□□ -0.27
CSF1P09603 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.34□□□□□ -0.27
CSF1P09603 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.34□□□□□ -0.27
CSF1P09603 AL450472.2-201ENST00000603663 1156 ntBASIC13.34□□□□□ -0.27
CSF1P09603 AC093512.1-201ENST00000617969 520 ntBASIC13.34□□□□□ -0.27
CSF1P09603 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.34□□□□□ -0.27
CSF1P09603 AL928921.2-201ENST00000641325 2442 ntBASIC13.34□□□□□ -0.27
CSF1P09603 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CSF1P09603 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms