Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
OPN1SWP03999 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
OPN1SWP03999 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
OPN1SWP03999 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
OPN1SWP03999 AC097359.2-201ENST00000604992 2389 ntBASIC14.4□□□□□ -0.1
OPN1SWP03999 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
OPN1SWP03999 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.4□□□□□ -0.1
OPN1SWP03999 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
OPN1SWP03999 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
OPN1SWP03999 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
OPN1SWP03999 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
OPN1SWP03999 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
OPN1SWP03999 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.4□□□□□ -0.1
OPN1SWP03999 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.4□□□□□ -0.1
OPN1SWP03999 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
OPN1SWP03999 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.11
OPN1SWP03999 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
OPN1SWP03999 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
OPN1SWP03999 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.39□□□□□ -0.11
OPN1SWP03999 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.39□□□□□ -0.11
OPN1SWP03999 REXO1L4P-201ENST00000605109 1937 ntBASIC14.39□□□□□ -0.11
OPN1SWP03999 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
OPN1SWP03999 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.39□□□□□ -0.11
OPN1SWP03999 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
OPN1SWP03999 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
OPN1SWP03999 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
OPN1SWP03999 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
OPN1SWP03999 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
OPN1SWP03999 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
OPN1SWP03999 AC023141.5-201ENST00000458585 616 ntBASIC14.39□□□□□ -0.11
OPN1SWP03999 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.39□□□□□ -0.11
OPN1SWP03999 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.39□□□□□ -0.11
OPN1SWP03999 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.39□□□□□ -0.11
OPN1SWP03999 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.39□□□□□ -0.11
OPN1SWP03999 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
OPN1SWP03999 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.39□□□□□ -0.11
OPN1SWP03999 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.39□□□□□ -0.11
OPN1SWP03999 AC011467.4-201ENST00000594891 528 ntBASIC14.39□□□□□ -0.11
OPN1SWP03999 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.39□□□□□ -0.11
OPN1SWP03999 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.39□□□□□ -0.11
OPN1SWP03999 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.39□□□□□ -0.11
OPN1SWP03999 AF228730.6-201ENST00000641497 218 ntBASIC14.39□□□□□ -0.11
OPN1SWP03999 AC084121.3-201ENST00000641716 218 ntBASIC14.39□□□□□ -0.11
OPN1SWP03999 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
OPN1SWP03999 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
OPN1SWP03999 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
OPN1SWP03999 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
OPN1SWP03999 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
OPN1SWP03999 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
OPN1SWP03999 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
OPN1SWP03999 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.39□□□□□ -0.11
OPN1SWP03999 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
OPN1SWP03999 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
OPN1SWP03999 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
OPN1SWP03999 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.38□□□□□ -0.11
OPN1SWP03999 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
OPN1SWP03999 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.38□□□□□ -0.11
OPN1SWP03999 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
OPN1SWP03999 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
OPN1SWP03999 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
OPN1SWP03999 AL080243.2-201ENST00000418783 582 ntBASIC14.38□□□□□ -0.11
OPN1SWP03999 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.38□□□□□ -0.11
OPN1SWP03999 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.38□□□□□ -0.11
OPN1SWP03999 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.38□□□□□ -0.11
OPN1SWP03999 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.38□□□□□ -0.11
OPN1SWP03999 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.38□□□□□ -0.11
OPN1SWP03999 LINC00628-201ENST00000628516 1289 ntBASIC14.38□□□□□ -0.11
OPN1SWP03999 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.38□□□□□ -0.11
OPN1SWP03999 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.38□□□□□ -0.11
OPN1SWP03999 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
OPN1SWP03999 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
OPN1SWP03999 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
OPN1SWP03999 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.38□□□□□ -0.11
OPN1SWP03999 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms