Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNX4O95219 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.52□□□□□ -0.09
SNX4O95219 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SNX4O95219 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SNX4O95219 PIN1P1-201ENST00000412108 996 ntBASIC14.52□□□□□ -0.09
SNX4O95219 MEP1AP4-201ENST00000423244 1087 ntBASIC14.52□□□□□ -0.09
SNX4O95219 SPTLC1P1-201ENST00000447199 261 ntBASIC14.52□□□□□ -0.09
SNX4O95219 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.52□□□□□ -0.09
SNX4O95219 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.52□□□□□ -0.09
SNX4O95219 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.52□□□□□ -0.09
SNX4O95219 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.52□□□□□ -0.09
SNX4O95219 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.52□□□□□ -0.09
SNX4O95219 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.52□□□□□ -0.09
SNX4O95219 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNX4O95219 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNX4O95219 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SNX4O95219 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNX4O95219 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SNX4O95219 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SNX4O95219 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SNX4O95219 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNX4O95219 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNX4O95219 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
SNX4O95219 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SNX4O95219 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.52□□□□□ -0.09
SNX4O95219 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNX4O95219 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNX4O95219 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SNX4O95219 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SNX4O95219 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SNX4O95219 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.51□□□□□ -0.09
SNX4O95219 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX4O95219 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.51□□□□□ -0.09
SNX4O95219 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX4O95219 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX4O95219 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SNX4O95219 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SNX4O95219 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.51□□□□□ -0.09
SNX4O95219 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNX4O95219 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX4O95219 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.51□□□□□ -0.09
SNX4O95219 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SNX4O95219 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNX4O95219 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX4O95219 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX4O95219 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX4O95219 MIR661-201ENST00000384842 89 ntBASIC14.51□□□□□ -0.09
SNX4O95219 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNX4O95219 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX4O95219 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.51□□□□□ -0.09
SNX4O95219 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.51□□□□□ -0.09
SNX4O95219 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.51□□□□□ -0.09
SNX4O95219 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.51□□□□□ -0.09
SNX4O95219 DOC2GP-202ENST00000514950 1163 ntBASIC14.51□□□□□ -0.09
SNX4O95219 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNX4O95219 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNX4O95219 LINC02084-201ENST00000606069 1096 ntBASIC14.51□□□□□ -0.09
SNX4O95219 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.51□□□□□ -0.09
SNX4O95219 AC004461.2-201ENST00000629517 803 ntBASIC14.51□□□□□ -0.09
SNX4O95219 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SNX4O95219 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.51□□□□□ -0.09
SNX4O95219 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX4O95219 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SNX4O95219 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
SNX4O95219 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.51□□□□□ -0.09
SNX4O95219 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX4O95219 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNX4O95219 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.51□□□□□ -0.09
SNX4O95219 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SNX4O95219 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX4O95219 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNX4O95219 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.5□□□□□ -0.09
SNX4O95219 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SNX4O95219 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNX4O95219 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SNX4O95219 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SNX4O95219 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
SNX4O95219 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNX4O95219 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SNX4O95219 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNX4O95219 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.5□□□□□ -0.09
SNX4O95219 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.5□□□□□ -0.09
SNX4O95219 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.5□□□□□ -0.09
SNX4O95219 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SNX4O95219 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SNX4O95219 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.5□□□□□ -0.09
SNX4O95219 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.5□□□□□ -0.09
SNX4O95219 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNX4O95219 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNX4O95219 AC005912.2-201ENST00000619492 2400 ntBASIC14.5□□□□□ -0.09
SNX4O95219 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
SNX4O95219 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.5□□□□□ -0.09
SNX4O95219 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SNX4O95219 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNX4O95219 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SNX4O95219 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SNX4O95219 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SNX4O95219 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.5□□□□□ -0.09
SNX4O95219 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.5□□□□□ -0.09
SNX4O95219 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms