Protein–RNA interactions for Protein: O75293

GADD45B, Growth arrest and DNA damage-inducible protein GADD45 beta, humanhuman

Predicted RBP Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45BO75293 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GADD45BO75293 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GADD45BO75293 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GADD45BO75293 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
GADD45BO75293 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
GADD45BO75293 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
GADD45BO75293 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GADD45BO75293 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
GADD45BO75293 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC17.56■□□□□ 0.4
GADD45BO75293 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GADD45BO75293 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GADD45BO75293 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
GADD45BO75293 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GADD45BO75293 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
GADD45BO75293 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GADD45BO75293 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GADD45BO75293 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
GADD45BO75293 BEND3P1-201ENST00000421591 1944 ntBASIC17.55■□□□□ 0.4
GADD45BO75293 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.55■□□□□ 0.4
GADD45BO75293 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GADD45BO75293 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GADD45BO75293 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
GADD45BO75293 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
GADD45BO75293 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GADD45BO75293 AL133267.1-201ENST00000398220 340 ntBASIC17.55■□□□□ 0.4
GADD45BO75293 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.55■□□□□ 0.4
GADD45BO75293 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GADD45BO75293 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GADD45BO75293 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.55■□□□□ 0.4
GADD45BO75293 AC007967.4-201ENST00000614700 386 ntBASIC17.55■□□□□ 0.4
GADD45BO75293 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
GADD45BO75293 LINC00628-201ENST00000628516 1289 ntBASIC17.55■□□□□ 0.4
GADD45BO75293 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
GADD45BO75293 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.55■□□□□ 0.4
GADD45BO75293 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.55■□□□□ 0.4
GADD45BO75293 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GADD45BO75293 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GADD45BO75293 AL161772.1-201ENST00000610494 4412 ntBASIC17.55■□□□□ 0.4
GADD45BO75293 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
GADD45BO75293 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GADD45BO75293 AL157414.3-201ENST00000624276 1954 ntBASIC17.55■□□□□ 0.4
GADD45BO75293 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GADD45BO75293 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.55■□□□□ 0.4
GADD45BO75293 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GADD45BO75293 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.55■□□□□ 0.4
GADD45BO75293 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
GADD45BO75293 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GADD45BO75293 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.55■□□□□ 0.4
GADD45BO75293 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
GADD45BO75293 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
GADD45BO75293 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.54■□□□□ 0.4
GADD45BO75293 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC17.54■□□□□ 0.4
GADD45BO75293 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
GADD45BO75293 MKNK2P1-201ENST00000437526 628 ntBASIC17.54■□□□□ 0.4
GADD45BO75293 RBPMS2P1-201ENST00000437762 623 ntBASIC17.54■□□□□ 0.4
GADD45BO75293 RPL13P2-201ENST00000440687 659 ntBASIC17.54■□□□□ 0.4
GADD45BO75293 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.54■□□□□ 0.4
GADD45BO75293 AC026150.2-201ENST00000564693 1156 ntBASIC17.54■□□□□ 0.4
GADD45BO75293 MIR4453-201ENST00000584019 89 ntBASIC17.54■□□□□ 0.4
GADD45BO75293 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.54■□□□□ 0.4
GADD45BO75293 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 AL645728.2-202ENST00000641679 227 ntBASIC17.54■□□□□ 0.4
GADD45BO75293 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
GADD45BO75293 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC17.54■□□□□ 0.4
GADD45BO75293 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GADD45BO75293 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GADD45BO75293 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
GADD45BO75293 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GADD45BO75293 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GADD45BO75293 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.53■□□□□ 0.4
GADD45BO75293 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
GADD45BO75293 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GADD45BO75293 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
GADD45BO75293 AL121723.1-201ENST00000445194 1519 ntBASIC17.53■□□□□ 0.4
GADD45BO75293 ELL2P1-201ENST00000413990 1906 ntBASIC17.53■□□□□ 0.4
GADD45BO75293 MBLAC2-202ENST00000514906 1936 ntBASIC17.53■□□□□ 0.4
GADD45BO75293 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC17.53■□□□□ 0.4
GADD45BO75293 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GADD45BO75293 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms