Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CUBNO60494 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CUBNO60494 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CUBNO60494 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.01□□□□□ -0.49
CUBNO60494 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
CUBNO60494 LYPLA2P1-203ENST00000447689 696 ntBASIC12.01□□□□□ -0.49
CUBNO60494 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CUBNO60494 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC12.01□□□□□ -0.49
CUBNO60494 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC12.01□□□□□ -0.49
CUBNO60494 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC12.01□□□□□ -0.49
CUBNO60494 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.01□□□□□ -0.49
CUBNO60494 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
CUBNO60494 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.01□□□□□ -0.49
CUBNO60494 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CUBNO60494 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.01□□□□□ -0.49
CUBNO60494 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CUBNO60494 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CUBNO60494 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.01□□□□□ -0.49
CUBNO60494 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC12.01□□□□□ -0.49
CUBNO60494 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.01□□□□□ -0.49
CUBNO60494 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 AC011247.3-201ENST00000603297 438 ntBASIC12.01□□□□□ -0.49
CUBNO60494 AC084781.1-201ENST00000613737 656 ntBASIC12.01□□□□□ -0.49
CUBNO60494 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CUBNO60494 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 REXO1L4P-201ENST00000605109 1937 ntBASIC12.01□□□□□ -0.49
CUBNO60494 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.01□□□□□ -0.49
CUBNO60494 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.01□□□□□ -0.49
CUBNO60494 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 AC239868.1-201ENST00000369385 493 ntBASIC12.01□□□□□ -0.49
CUBNO60494 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC12.01□□□□□ -0.49
CUBNO60494 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.01□□□□□ -0.49
CUBNO60494 RNF146-211ENST00000609447 607 ntTSL 4 BASIC12.01□□□□□ -0.49
CUBNO60494 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.01□□□□□ -0.49
CUBNO60494 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CUBNO60494 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CUBNO60494 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.01□□□□□ -0.49
CUBNO60494 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CUBNO60494 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CUBNO60494 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12□□□□□ -0.49
CUBNO60494 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC12□□□□□ -0.49
CUBNO60494 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC12□□□□□ -0.49
CUBNO60494 RN7SKP175-201ENST00000408472 289 ntBASIC12□□□□□ -0.49
CUBNO60494 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC12□□□□□ -0.49
CUBNO60494 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC12□□□□□ -0.49
CUBNO60494 FTLP5-201ENST00000586853 534 ntBASIC12□□□□□ -0.49
CUBNO60494 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CUBNO60494 AL157813.1-201ENST00000612996 587 ntBASIC12□□□□□ -0.49
CUBNO60494 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12□□□□□ -0.49
CUBNO60494 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CUBNO60494 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CUBNO60494 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CUBNO60494 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CUBNO60494 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12□□□□□ -0.49
CUBNO60494 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC12□□□□□ -0.49
CUBNO60494 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CUBNO60494 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CUBNO60494 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CUBNO60494 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CUBNO60494 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CUBNO60494 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CUBNO60494 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CUBNO60494 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12□□□□□ -0.49
CUBNO60494 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12□□□□□ -0.49
CUBNO60494 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CUBNO60494 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CUBNO60494 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12□□□□□ -0.49
CUBNO60494 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CUBNO60494 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC12□□□□□ -0.49
CUBNO60494 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12□□□□□ -0.49
CUBNO60494 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12□□□□□ -0.49
CUBNO60494 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC12□□□□□ -0.49
CUBNO60494 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CUBNO60494 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12□□□□□ -0.49
CUBNO60494 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12□□□□□ -0.49
CUBNO60494 PCDHA1-201ENST00000378133 2726 ntBASIC12□□□□□ -0.49
CUBNO60494 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC12□□□□□ -0.49
CUBNO60494 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms