Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC28A2O43868 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A2O43868 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A2O43868 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A2O43868 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A2O43868 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A2O43868 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A2O43868 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC28A2O43868 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A2O43868 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC28A2O43868 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SLC28A2O43868 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A2O43868 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A2O43868 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A2O43868 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC28A2O43868 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A2O43868 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC28A2O43868 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A2O43868 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A2O43868 AL136982.4-201ENST00000437689 1740 ntBASIC14.86□□□□□ -0.03
SLC28A2O43868 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A2O43868 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A2O43868 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC28A2O43868 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
SLC28A2O43868 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A2O43868 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC28A2O43868 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A2O43868 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC28A2O43868 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC28A2O43868 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A2O43868 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC28A2O43868 OR2I1P-210ENST00000642037 4691 ntBASIC14.86□□□□□ -0.03
SLC28A2O43868 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC28A2O43868 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A2O43868 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.86□□□□□ -0.03
SLC28A2O43868 CSF2RBP1-201ENST00000447905 391 ntBASIC14.86□□□□□ -0.03
SLC28A2O43868 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A2O43868 AC104596.2-201ENST00000512793 793 ntBASIC14.86□□□□□ -0.03
SLC28A2O43868 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A2O43868 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC28A2O43868 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A2O43868 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC28A2O43868 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
SLC28A2O43868 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.86□□□□□ -0.03
SLC28A2O43868 AC106872.11-201ENST00000605838 421 ntBASIC14.86□□□□□ -0.03
SLC28A2O43868 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC28A2O43868 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC28A2O43868 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A2O43868 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A2O43868 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A2O43868 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC28A2O43868 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A2O43868 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC28A2O43868 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A2O43868 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SLC28A2O43868 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC28A2O43868 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SLC28A2O43868 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SLC28A2O43868 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A2O43868 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A2O43868 AL109954.1-202ENST00000564051 2148 ntBASIC14.86□□□□□ -0.03
SLC28A2O43868 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC28A2O43868 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SLC28A2O43868 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC28A2O43868 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A2O43868 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A2O43868 AC138035.3-201ENST00000622706 2791 ntBASIC14.85□□□□□ -0.03
SLC28A2O43868 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A2O43868 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A2O43868 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC28A2O43868 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A2O43868 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A2O43868 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A2O43868 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A2O43868 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A2O43868 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC28A2O43868 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SLC28A2O43868 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A2O43868 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC28A2O43868 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
SLC28A2O43868 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A2O43868 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A2O43868 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.85□□□□□ -0.03
SLC28A2O43868 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SLC28A2O43868 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A2O43868 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A2O43868 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.85□□□□□ -0.03
SLC28A2O43868 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC28A2O43868 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
SLC28A2O43868 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.85□□□□□ -0.03
SLC28A2O43868 AL139010.1-201ENST00000454878 894 ntBASIC14.85□□□□□ -0.03
SLC28A2O43868 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.85□□□□□ -0.03
SLC28A2O43868 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.85□□□□□ -0.03
SLC28A2O43868 USP32P1-208ENST00000506594 1164 ntBASIC14.85□□□□□ -0.03
SLC28A2O43868 SDHAP3-202ENST00000515467 728 ntBASIC14.85□□□□□ -0.03
SLC28A2O43868 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.85□□□□□ -0.03
SLC28A2O43868 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC28A2O43868 MIR4313-201ENST00000580760 101 ntBASIC14.85□□□□□ -0.03
SLC28A2O43868 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC28A2O43868 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms