Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RNF113AO15541 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF113AO15541 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF113AO15541 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
RNF113AO15541 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF113AO15541 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF113AO15541 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF113AO15541 ACE3P-201ENST00000423435 1973 ntBASIC18.33■□□□□ 0.52
RNF113AO15541 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF113AO15541 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RNF113AO15541 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF113AO15541 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF113AO15541 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF113AO15541 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF113AO15541 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF113AO15541 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF113AO15541 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF113AO15541 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF113AO15541 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
RNF113AO15541 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF113AO15541 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
RNF113AO15541 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF113AO15541 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF113AO15541 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF113AO15541 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF113AO15541 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF113AO15541 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF113AO15541 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF113AO15541 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF113AO15541 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF113AO15541 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF113AO15541 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF113AO15541 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RNF113AO15541 FTH1P14-201ENST00000482930 551 ntBASIC18.32■□□□□ 0.52
RNF113AO15541 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.32■□□□□ 0.52
RNF113AO15541 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF113AO15541 AC025279.2-201ENST00000569730 653 ntBASIC18.32■□□□□ 0.52
RNF113AO15541 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF113AO15541 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF113AO15541 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF113AO15541 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF113AO15541 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF113AO15541 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF113AO15541 LINC00528-201ENST00000600723 2160 ntBASIC18.32■□□□□ 0.52
RNF113AO15541 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF113AO15541 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF113AO15541 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF113AO15541 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF113AO15541 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RNF113AO15541 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF113AO15541 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF113AO15541 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF113AO15541 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RNF113AO15541 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF113AO15541 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF113AO15541 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF113AO15541 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF113AO15541 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF113AO15541 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF113AO15541 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF113AO15541 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF113AO15541 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF113AO15541 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF113AO15541 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF113AO15541 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RNF113AO15541 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF113AO15541 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.31■□□□□ 0.52
RNF113AO15541 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.31■□□□□ 0.52
RNF113AO15541 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.31■□□□□ 0.52
RNF113AO15541 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.31■□□□□ 0.52
RNF113AO15541 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF113AO15541 AL512343.1-201ENST00000605837 169 ntBASIC18.31■□□□□ 0.52
RNF113AO15541 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF113AO15541 AL603764.1-201ENST00000636452 321 ntBASIC18.31■□□□□ 0.52
RNF113AO15541 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF113AO15541 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF113AO15541 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF113AO15541 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF113AO15541 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF113AO15541 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF113AO15541 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RNF113AO15541 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF113AO15541 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF113AO15541 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF113AO15541 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF113AO15541 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF113AO15541 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF113AO15541 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF113AO15541 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF113AO15541 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
RNF113AO15541 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF113AO15541 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF113AO15541 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF113AO15541 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF113AO15541 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF113AO15541 AC055811.4-201ENST00000624039 1754 ntBASIC18.3■□□□□ 0.52
RNF113AO15541 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF113AO15541 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF113AO15541 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF113AO15541 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms