Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCDH17O14917 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
PCDH17O14917 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PCDH17O14917 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.7□□□□□ -0.06
PCDH17O14917 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDH17O14917 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH17O14917 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH17O14917 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH17O14917 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCDH17O14917 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.7□□□□□ -0.06
PCDH17O14917 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH17O14917 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH17O14917 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH17O14917 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH17O14917 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDH17O14917 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PCDH17O14917 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH17O14917 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCDH17O14917 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
PCDH17O14917 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PCDH17O14917 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
PCDH17O14917 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH17O14917 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH17O14917 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH17O14917 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH17O14917 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
PCDH17O14917 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
PCDH17O14917 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH17O14917 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH17O14917 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.7□□□□□ -0.06
PCDH17O14917 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH17O14917 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH17O14917 AC007389.4-201ENST00000454674 793 ntBASIC14.7□□□□□ -0.06
PCDH17O14917 INE1-201ENST00000456273 945 ntBASIC14.7□□□□□ -0.06
PCDH17O14917 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.7□□□□□ -0.06
PCDH17O14917 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDH17O14917 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDH17O14917 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDH17O14917 BRI3BPP1-201ENST00000594224 787 ntBASIC14.7□□□□□ -0.06
PCDH17O14917 IGHV3-72-202ENST00000621503 303 ntBASIC14.7□□□□□ -0.06
PCDH17O14917 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
PCDH17O14917 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDH17O14917 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PCDH17O14917 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PCDH17O14917 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.7□□□□□ -0.06
PCDH17O14917 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDH17O14917 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCDH17O14917 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH17O14917 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDH17O14917 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH17O14917 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDH17O14917 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
PCDH17O14917 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDH17O14917 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDH17O14917 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCDH17O14917 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH17O14917 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH17O14917 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH17O14917 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
PCDH17O14917 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDH17O14917 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.69□□□□□ -0.06
PCDH17O14917 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCDH17O14917 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH17O14917 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PCDH17O14917 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH17O14917 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PCDH17O14917 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH17O14917 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH17O14917 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDH17O14917 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
PCDH17O14917 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDH17O14917 MIR4313-201ENST00000580760 101 ntBASIC14.69□□□□□ -0.06
PCDH17O14917 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.69□□□□□ -0.06
PCDH17O14917 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDH17O14917 AL033527.5-201ENST00000641382 801 ntBASIC14.69□□□□□ -0.06
PCDH17O14917 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
PCDH17O14917 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.69□□□□□ -0.06
PCDH17O14917 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH17O14917 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDH17O14917 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDH17O14917 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH17O14917 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH17O14917 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH17O14917 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
PCDH17O14917 CICP23-201ENST00000605013 2741 ntBASIC14.69□□□□□ -0.06
PCDH17O14917 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDH17O14917 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDH17O14917 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDH17O14917 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH17O14917 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.69□□□□□ -0.06
PCDH17O14917 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDH17O14917 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PCDH17O14917 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH17O14917 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH17O14917 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH17O14917 SNX18-202ENST00000343017 3140 ntBASIC14.68□□□□□ -0.06
PCDH17O14917 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH17O14917 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDH17O14917 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH17O14917 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms