Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SNX18-202ENST00000343017 3140 ntBASIC16.36■□□□□ 0.21
O00370 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
O00370 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.36■□□□□ 0.21
O00370 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.36■□□□□ 0.21
O00370 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.36■□□□□ 0.21
O00370 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
O00370 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
O00370 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
O00370 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
O00370 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
O00370 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.36■□□□□ 0.21
O00370 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
O00370 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
O00370 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
O00370 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.36■□□□□ 0.21
O00370 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
O00370 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.36■□□□□ 0.21
O00370 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.36■□□□□ 0.21
O00370 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
O00370 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
O00370 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.36■□□□□ 0.21
O00370 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.36■□□□□ 0.21
O00370 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.36■□□□□ 0.21
O00370 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.36■□□□□ 0.21
O00370 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.36■□□□□ 0.21
O00370 WFDC1-204ENST00000613603 549 ntBASIC16.36■□□□□ 0.21
O00370 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
O00370 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
O00370 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
O00370 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.36■□□□□ 0.21
O00370 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.36■□□□□ 0.21
O00370 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
O00370 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
O00370 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
O00370 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
O00370 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
O00370 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.36■□□□□ 0.21
O00370 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
O00370 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
O00370 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
O00370 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
O00370 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
O00370 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
O00370 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
O00370 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.35■□□□□ 0.21
O00370 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
O00370 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.35■□□□□ 0.21
O00370 MROH4P-201ENST00000431302 1578 ntBASIC16.35■□□□□ 0.21
O00370 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
O00370 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
O00370 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
O00370 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
O00370 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.35■□□□□ 0.21
O00370 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
O00370 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
O00370 AL138799.1-201ENST00000448213 1675 ntBASIC16.35■□□□□ 0.21
O00370 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
O00370 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
O00370 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
O00370 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
O00370 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.35■□□□□ 0.21
O00370 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.35■□□□□ 0.21
O00370 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.35■□□□□ 0.21
O00370 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
O00370 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
O00370 AC093813.1-201ENST00000605066 256 ntBASIC16.35■□□□□ 0.21
O00370 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.35■□□□□ 0.21
O00370 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
O00370 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
O00370 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.35■□□□□ 0.21
O00370 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
O00370 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
O00370 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
O00370 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
O00370 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
O00370 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.35■□□□□ 0.21
O00370 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
O00370 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
O00370 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
O00370 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.35■□□□□ 0.21
O00370 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
O00370 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
O00370 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
O00370 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
O00370 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
O00370 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
O00370 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.34■□□□□ 0.21
O00370 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
O00370 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
O00370 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.34■□□□□ 0.21
O00370 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
O00370 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
O00370 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
O00370 C1QBPP1-201ENST00000400117 770 ntBASIC16.34■□□□□ 0.21
O00370 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.34■□□□□ 0.21
O00370 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.34■□□□□ 0.21
O00370 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.34■□□□□ 0.21
O00370 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.34■□□□□ 0.21
O00370 SAMD11P1-201ENST00000571429 661 ntBASIC16.34■□□□□ 0.21
O00370 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 214.6 ms