Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 AC023511.2-201ENST00000618803 211 ntBASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 TNRC18P2-201ENST00000417666 2714 ntBASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
POLR1DQ9Y2S0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 IGHV3-42-201ENST00000520410 361 ntBASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 AL138828.2-201ENST00000615812 383 ntBASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 AC084364.1-201ENST00000551967 1556 ntBASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR1DQ9Y2S0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms