Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC132938.2-201ENST00000579188 680 ntBASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 AL591163.1-201ENST00000641757 987 ntBASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 TDH-203ENST00000531764 1110 ntBASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 AC005225.4-201ENST00000557330 545 ntBASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 IGHV3-72-202ENST00000621503 303 ntBASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 TNRC18P2-201ENST00000417666 2714 ntBASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDHA4Q9UN74 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 ACTBP8-201ENST00000403258 1108 ntBASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 AC007389.4-201ENST00000454674 793 ntBASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 KRT18P25-201ENST00000508931 1278 ntBASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 AL137783.1-201ENST00000623494 1896 ntBASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA4Q9UN74 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms