Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 AC013355.1-201ENST00000562625 723 ntBASIC17.57■□□□□ 0.4
PNMA3Q9UL41 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 RN7SL774P-201ENST00000577467 290 ntBASIC17.57■□□□□ 0.4
PNMA3Q9UL41 MIR4722-201ENST00000578292 60 ntBASIC17.57■□□□□ 0.4
PNMA3Q9UL41 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 AL645939.5-201ENST00000606834 243 ntBASIC17.57■□□□□ 0.4
PNMA3Q9UL41 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 AL353726.2-201ENST00000623259 884 ntBASIC17.57■□□□□ 0.4
PNMA3Q9UL41 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 AC055811.4-201ENST00000624039 1754 ntBASIC17.57■□□□□ 0.4
PNMA3Q9UL41 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PNMA3Q9UL41 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 TUBB8P8-201ENST00000458717 1058 ntBASIC17.56■□□□□ 0.4
PNMA3Q9UL41 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 FGFR3P5-201ENST00000564496 886 ntBASIC17.56■□□□□ 0.4
PNMA3Q9UL41 MIR4706-201ENST00000582134 82 ntBASIC17.56■□□□□ 0.4
PNMA3Q9UL41 RN7SL275P-201ENST00000582762 335 ntBASIC17.56■□□□□ 0.4
PNMA3Q9UL41 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.56■□□□□ 0.4
PNMA3Q9UL41 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PNMA3Q9UL41 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
PNMA3Q9UL41 AC026691.1-201ENST00000602502 2017 ntBASIC17.55■□□□□ 0.4
PNMA3Q9UL41 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PNMA3Q9UL41 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PNMA3Q9UL41 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PNMA3Q9UL41 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.55■□□□□ 0.4
PNMA3Q9UL41 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PNMA3Q9UL41 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PNMA3Q9UL41 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PNMA3Q9UL41 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PNMA3Q9UL41 CLUHP2-201ENST00000426660 1303 ntBASIC17.55■□□□□ 0.4
PNMA3Q9UL41 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.55■□□□□ 0.4
PNMA3Q9UL41 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms