Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 AC020658.6-201ENST00000623564 1870 ntBASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 BRWD1P1-201ENST00000401091 371 ntBASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HDAC6Q9UBN7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 AL109954.1-202ENST00000564051 2148 ntBASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HDAC6Q9UBN7 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 AC026954.1-201ENST00000429771 1293 ntBASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 AC107373.2-201ENST00000607735 490 ntBASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 AC138035.3-201ENST00000622706 2791 ntBASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HDAC6Q9UBN7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms