Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.73□□□□□ -0.21
NLKQ9UBE8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.73□□□□□ -0.21
NLKQ9UBE8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.73□□□□□ -0.21
NLKQ9UBE8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.73□□□□□ -0.21
NLKQ9UBE8 AC243562.1-201ENST00000560672 389 ntBASIC13.73□□□□□ -0.21
NLKQ9UBE8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.73□□□□□ -0.21
NLKQ9UBE8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.73□□□□□ -0.21
NLKQ9UBE8 AL138918.1-201ENST00000568306 659 ntBASIC13.73□□□□□ -0.21
NLKQ9UBE8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.73□□□□□ -0.21
NLKQ9UBE8 MIR4469-201ENST00000583919 79 ntBASIC13.73□□□□□ -0.21
NLKQ9UBE8 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.73□□□□□ -0.21
NLKQ9UBE8 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.73□□□□□ -0.21
NLKQ9UBE8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.73□□□□□ -0.21
NLKQ9UBE8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
NLKQ9UBE8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.73□□□□□ -0.21
NLKQ9UBE8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NLKQ9UBE8 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NLKQ9UBE8 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NLKQ9UBE8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.73□□□□□ -0.21
NLKQ9UBE8 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NLKQ9UBE8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.73□□□□□ -0.21
NLKQ9UBE8 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.73□□□□□ -0.21
NLKQ9UBE8 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NLKQ9UBE8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NLKQ9UBE8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NLKQ9UBE8 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NLKQ9UBE8 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NLKQ9UBE8 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NLKQ9UBE8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NLKQ9UBE8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NLKQ9UBE8 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NLKQ9UBE8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.73□□□□□ -0.21
NLKQ9UBE8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NLKQ9UBE8 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.72□□□□□ -0.21
NLKQ9UBE8 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 ZBED1P1-201ENST00000502364 1930 ntBASIC13.72□□□□□ -0.21
NLKQ9UBE8 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 DGCR9-201ENST00000609630 2415 ntBASIC13.72□□□□□ -0.21
NLKQ9UBE8 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 RPSAP43-201ENST00000402237 625 ntBASIC13.72□□□□□ -0.21
NLKQ9UBE8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 UPF3AP3-201ENST00000420996 769 ntBASIC13.72□□□□□ -0.21
NLKQ9UBE8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 AC112482.1-201ENST00000492080 688 ntBASIC13.72□□□□□ -0.21
NLKQ9UBE8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 YBX1P5-201ENST00000509441 847 ntBASIC13.72□□□□□ -0.21
NLKQ9UBE8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 AL365330.1-201ENST00000607459 531 ntBASIC13.72□□□□□ -0.21
NLKQ9UBE8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 AL589702.1-201ENST00000641229 1509 ntBASIC13.72□□□□□ -0.21
NLKQ9UBE8 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms