Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 FAM45BP-202ENST00000592932 1624 ntBASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.81□□□□□ -0.2
PARPBPQ9NWS1 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 ST20-AS1-201ENST00000560255 4223 ntBASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 AL662799.1-202ENST00000614205 422 ntBASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 TMBIM7P-203ENST00000641617 1718 ntBASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 AC092384.3-202ENST00000564646 2873 ntBASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 AC090616.6-203ENST00000579186 1945 ntBASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
PARPBPQ9NWS1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 AC134915.1-201ENST00000426461 574 ntBASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 AL442647.2-201ENST00000429864 857 ntBASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PARPBPQ9NWS1 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms