Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 AP002414.2-201ENST00000591780 3365 ntBASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 AL645937.2-201ENST00000396808 931 ntBASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 HMGN1P19-201ENST00000436976 333 ntBASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 AC120045.2-201ENST00000567334 178 ntBASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 AP000845.1-201ENST00000581677 2131 ntBASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 AC092364.2-202ENST00000597012 1073 ntBASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 CHCHD2P3-201ENST00000603038 451 ntBASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 AC007787.1-201ENST00000588095 1583 ntBASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBQLN4Q9NRR5 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 C1QBPP1-201ENST00000400117 770 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms