Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 CRYGEP-201ENST00000412192 528 ntBASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 IGLL3P-201ENST00000412472 434 ntBASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 KRT18P67-201ENST00000432816 1264 ntBASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 AC092910.1-201ENST00000482027 1129 ntBASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 AC024267.1-201ENST00000582320 895 ntBASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 AC107918.4-201ENST00000641966 3141 ntBASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 AC140658.5-201ENST00000438532 169 ntBASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 AC096734.2-201ENST00000562054 433 ntBASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 AC023141.13-201ENST00000604991 943 ntBASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 AL445228.2-201ENST00000605589 952 ntBASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 AC010507.1-201ENST00000633895 436 ntBASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 AC007064.4-201ENST00000637740 555 ntBASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SND1-IT1Q9HBX3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms