Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.76□□□□□ -0.05
PIF1Q9H611 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PIF1Q9H611 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.76□□□□□ -0.05
PIF1Q9H611 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.76□□□□□ -0.05
PIF1Q9H611 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.76□□□□□ -0.05
PIF1Q9H611 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PIF1Q9H611 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 HLA-H-201ENST00000383620 1096 ntBASIC14.76□□□□□ -0.05
PIF1Q9H611 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 YBX2P1-201ENST00000394192 760 ntBASIC14.76□□□□□ -0.05
PIF1Q9H611 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.76□□□□□ -0.05
PIF1Q9H611 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PIF1Q9H611 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.76□□□□□ -0.05
PIF1Q9H611 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.76□□□□□ -0.05
PIF1Q9H611 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.76□□□□□ -0.05
PIF1Q9H611 AC243562.1-201ENST00000560672 389 ntBASIC14.76□□□□□ -0.05
PIF1Q9H611 AP000842.3-202ENST00000569238 1080 ntBASIC14.76□□□□□ -0.05
PIF1Q9H611 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.76□□□□□ -0.05
PIF1Q9H611 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.76□□□□□ -0.05
PIF1Q9H611 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.76□□□□□ -0.05
PIF1Q9H611 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.76□□□□□ -0.05
PIF1Q9H611 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PIF1Q9H611 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PIF1Q9H611 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PIF1Q9H611 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PIF1Q9H611 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIF1Q9H611 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIF1Q9H611 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PIF1Q9H611 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PIF1Q9H611 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PIF1Q9H611 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PIF1Q9H611 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PIF1Q9H611 AC079781.5-202ENST00000641784 3743 ntBASIC14.75□□□□□ -0.05
PIF1Q9H611 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIF1Q9H611 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PIF1Q9H611 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PIF1Q9H611 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.75□□□□□ -0.05
PIF1Q9H611 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.75□□□□□ -0.05
PIF1Q9H611 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIF1Q9H611 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIF1Q9H611 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.75□□□□□ -0.05
PIF1Q9H611 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIF1Q9H611 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIF1Q9H611 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIF1Q9H611 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PIF1Q9H611 FAM58CP-201ENST00000435741 640 ntBASIC14.75□□□□□ -0.05
PIF1Q9H611 SPCS2P4-201ENST00000436160 681 ntBASIC14.75□□□□□ -0.05
PIF1Q9H611 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.75□□□□□ -0.05
PIF1Q9H611 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.75□□□□□ -0.05
PIF1Q9H611 KRT8P48-201ENST00000515599 1220 ntBASIC14.75□□□□□ -0.05
PIF1Q9H611 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.75□□□□□ -0.05
PIF1Q9H611 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.75□□□□□ -0.05
PIF1Q9H611 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.75□□□□□ -0.05
PIF1Q9H611 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.75□□□□□ -0.05
PIF1Q9H611 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.75□□□□□ -0.05
PIF1Q9H611 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.75□□□□□ -0.05
PIF1Q9H611 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.75□□□□□ -0.05
PIF1Q9H611 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.75□□□□□ -0.05
PIF1Q9H611 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PIF1Q9H611 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.75□□□□□ -0.05
PIF1Q9H611 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
PIF1Q9H611 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PIF1Q9H611 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.75□□□□□ -0.05
PIF1Q9H611 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
PIF1Q9H611 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PIF1Q9H611 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIF1Q9H611 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIF1Q9H611 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
PIF1Q9H611 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIF1Q9H611 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.75□□□□□ -0.05
PIF1Q9H611 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIF1Q9H611 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PIF1Q9H611 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PIF1Q9H611 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PIF1Q9H611 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PIF1Q9H611 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PIF1Q9H611 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PIF1Q9H611 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PIF1Q9H611 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PIF1Q9H611 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.74□□□□□ -0.05
PIF1Q9H611 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
PIF1Q9H611 WASH3P-207ENST00000560956 1394 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms