Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 JTB-202ENST00000356648 1040 ntTSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 NLK-203ENST00000582037 1503 ntTSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 AC005052.1-201ENST00000625181 2492 ntBASIC4.48□□□□□ -1.69
HMCN1Q96RW7 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 OR8B8-201ENST00000328064 1033 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 TPT1P9-201ENST00000413759 514 ntBASIC4.48□□□□□ -1.69
HMCN1Q96RW7 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 UGT1A12P-201ENST00000447084 853 ntBASIC4.48□□□□□ -1.69
HMCN1Q96RW7 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 ADIPOR1P2-201ENST00000554199 820 ntBASIC4.48□□□□□ -1.69
HMCN1Q96RW7 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC4.48□□□□□ -1.69
HMCN1Q96RW7 WASH5P-206ENST00000632506 1147 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 LDHAL6CP-201ENST00000502352 1142 ntBASIC4.47□□□□□ -1.69
HMCN1Q96RW7 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 REXO1L2P-201ENST00000425429 2069 ntBASIC4.47□□□□□ -1.69
HMCN1Q96RW7 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 DNM1P46-202ENST00000415963 882 ntBASIC4.47□□□□□ -1.69
HMCN1Q96RW7 AKR1B1P4-201ENST00000426552 922 ntBASIC4.47□□□□□ -1.69
HMCN1Q96RW7 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 CLPP-204ENST00000596149 745 ntTSL 2 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 MIR7704-201ENST00000610524 59 ntBASIC4.47□□□□□ -1.69
HMCN1Q96RW7 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 DUX4L33-201ENST00000635217 958 ntBASIC4.47□□□□□ -1.69
HMCN1Q96RW7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC4.47□□□□□ -1.69
HMCN1Q96RW7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms