Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.05□□□□□ -0.48
RAX2Q96IS3 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.05□□□□□ -0.48
RAX2Q96IS3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.05□□□□□ -0.48
RAX2Q96IS3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.05□□□□□ -0.48
RAX2Q96IS3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
RAX2Q96IS3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 HCG24-202ENST00000414398 717 ntTSL 3 BASIC12.05□□□□□ -0.48
RAX2Q96IS3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.05□□□□□ -0.48
RAX2Q96IS3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
RAX2Q96IS3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.05□□□□□ -0.48
RAX2Q96IS3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.05□□□□□ -0.48
RAX2Q96IS3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.05□□□□□ -0.48
RAX2Q96IS3 MIR4313-201ENST00000580760 101 ntBASIC12.05□□□□□ -0.48
RAX2Q96IS3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.05□□□□□ -0.48
RAX2Q96IS3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.05□□□□□ -0.48
RAX2Q96IS3 RPSAP52-203ENST00000622976 1023 ntBASIC12.05□□□□□ -0.48
RAX2Q96IS3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.05□□□□□ -0.48
RAX2Q96IS3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
RAX2Q96IS3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.05□□□□□ -0.48
RAX2Q96IS3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.05□□□□□ -0.48
RAX2Q96IS3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAX2Q96IS3 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
RAX2Q96IS3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC12.05□□□□□ -0.48
RAX2Q96IS3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.05□□□□□ -0.48
RAX2Q96IS3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAX2Q96IS3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RAX2Q96IS3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAX2Q96IS3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAX2Q96IS3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAX2Q96IS3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAX2Q96IS3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
RAX2Q96IS3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.04□□□□□ -0.48
RAX2Q96IS3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAX2Q96IS3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAX2Q96IS3 LINC02447-202ENST00000501888 2146 ntBASIC12.04□□□□□ -0.48
RAX2Q96IS3 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.04□□□□□ -0.48
RAX2Q96IS3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RAX2Q96IS3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RAX2Q96IS3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RAX2Q96IS3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAX2Q96IS3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAX2Q96IS3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RAX2Q96IS3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAX2Q96IS3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAX2Q96IS3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
RAX2Q96IS3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RAX2Q96IS3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
RAX2Q96IS3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAX2Q96IS3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAX2Q96IS3 SOCS2P1-201ENST00000417727 557 ntBASIC12.04□□□□□ -0.48
RAX2Q96IS3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.04□□□□□ -0.48
RAX2Q96IS3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.04□□□□□ -0.48
RAX2Q96IS3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.04□□□□□ -0.48
RAX2Q96IS3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.04□□□□□ -0.48
RAX2Q96IS3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.04□□□□□ -0.48
RAX2Q96IS3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.04□□□□□ -0.48
RAX2Q96IS3 AC120045.2-201ENST00000567334 178 ntBASIC12.04□□□□□ -0.48
RAX2Q96IS3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.04□□□□□ -0.48
RAX2Q96IS3 AC124283.3-201ENST00000570869 594 ntBASIC12.04□□□□□ -0.48
RAX2Q96IS3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RAX2Q96IS3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAX2Q96IS3 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAX2Q96IS3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAX2Q96IS3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAX2Q96IS3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAX2Q96IS3 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAX2Q96IS3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.04□□□□□ -0.48
RAX2Q96IS3 AC105917.1-201ENST00000506637 2539 ntBASIC12.04□□□□□ -0.48
RAX2Q96IS3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAX2Q96IS3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
RAX2Q96IS3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAX2Q96IS3 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
RAX2Q96IS3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAX2Q96IS3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.04□□□□□ -0.48
RAX2Q96IS3 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms