Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC104596.2-201ENST00000512793 793 ntBASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 AC120045.2-201ENST00000567334 178 ntBASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 AC093726.1-201ENST00000608064 963 ntBASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 MIR8072-201ENST00000614241 80 ntBASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 AJ011932.1-201ENST00000621707 465 ntBASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
PDLIM5Q96HC4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 AL157414.3-201ENST00000624276 1954 ntBASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 MIR770-201ENST00000390219 98 ntBASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 INTS4P2-202ENST00000614726 2019 ntBASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PDLIM5Q96HC4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
PDLIM5Q96HC4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.96□□□□□ -0.02
PDLIM5Q96HC4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PDLIM5Q96HC4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PDLIM5Q96HC4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 AC023908.3-201ENST00000564211 3047 ntBASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 AC092552.1-201ENST00000547243 906 ntBASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 TMEM261P1-201ENST00000604899 340 ntBASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 AC007431.3-201ENST00000623221 587 ntBASIC14.95□□□□□ -0.02
PDLIM5Q96HC4 BX539320.1-201ENST00000623759 877 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms