Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC097376.2-205ENST00000610159 5334 ntBASIC13.63□□□□□ -0.23
APH1AQ96BI3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.63□□□□□ -0.23
APH1AQ96BI3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.63□□□□□ -0.23
APH1AQ96BI3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.63□□□□□ -0.23
APH1AQ96BI3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
APH1AQ96BI3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.63□□□□□ -0.23
APH1AQ96BI3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.63□□□□□ -0.23
APH1AQ96BI3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
APH1AQ96BI3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
APH1AQ96BI3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.62□□□□□ -0.23
APH1AQ96BI3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.62□□□□□ -0.23
APH1AQ96BI3 C18orf15-201ENST00000623680 2534 ntBASIC13.62□□□□□ -0.23
APH1AQ96BI3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
APH1AQ96BI3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
APH1AQ96BI3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
APH1AQ96BI3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
APH1AQ96BI3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.62□□□□□ -0.23
APH1AQ96BI3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 NUS1P3-201ENST00000423502 862 ntBASIC13.62□□□□□ -0.23
APH1AQ96BI3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.62□□□□□ -0.23
APH1AQ96BI3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 TDH-203ENST00000531764 1110 ntBASIC13.62□□□□□ -0.23
APH1AQ96BI3 PTP4A1P2-201ENST00000546033 454 ntBASIC13.62□□□□□ -0.23
APH1AQ96BI3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.62□□□□□ -0.23
APH1AQ96BI3 SAMD11P1-201ENST00000571429 661 ntBASIC13.62□□□□□ -0.23
APH1AQ96BI3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.62□□□□□ -0.23
APH1AQ96BI3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
APH1AQ96BI3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.62□□□□□ -0.23
APH1AQ96BI3 IGHV3-72-202ENST00000621503 303 ntBASIC13.62□□□□□ -0.23
APH1AQ96BI3 AC005252.2-201ENST00000624630 1141 ntBASIC13.62□□□□□ -0.23
APH1AQ96BI3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.62□□□□□ -0.23
APH1AQ96BI3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
APH1AQ96BI3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.62□□□□□ -0.23
APH1AQ96BI3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.62□□□□□ -0.23
APH1AQ96BI3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.62□□□□□ -0.23
APH1AQ96BI3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
APH1AQ96BI3 CICP11-201ENST00000434745 2827 ntBASIC13.62□□□□□ -0.23
APH1AQ96BI3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
APH1AQ96BI3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APH1AQ96BI3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 ACTG1P3-201ENST00000431775 1114 ntBASIC13.61□□□□□ -0.23
APH1AQ96BI3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 AC239800.4-201ENST00000603712 296 ntBASIC13.61□□□□□ -0.23
APH1AQ96BI3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.61□□□□□ -0.23
APH1AQ96BI3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APH1AQ96BI3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms