Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
AP3S1Q92572 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
AP3S1Q92572 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
AP3S1Q92572 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
AP3S1Q92572 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
AP3S1Q92572 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.58□□□□□ -0.23
AP3S1Q92572 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
AP3S1Q92572 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
AP3S1Q92572 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
AP3S1Q92572 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
AP3S1Q92572 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
AP3S1Q92572 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
AP3S1Q92572 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
AP3S1Q92572 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S1Q92572 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S1Q92572 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S1Q92572 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S1Q92572 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S1Q92572 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.58□□□□□ -0.24
AP3S1Q92572 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.58□□□□□ -0.24
AP3S1Q92572 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.58□□□□□ -0.24
AP3S1Q92572 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.58□□□□□ -0.24
AP3S1Q92572 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S1Q92572 KRT18P27-201ENST00000427733 1299 ntBASIC13.58□□□□□ -0.24
AP3S1Q92572 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S1Q92572 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.58□□□□□ -0.24
AP3S1Q92572 AL513480.1-201ENST00000451731 511 ntBASIC13.58□□□□□ -0.24
AP3S1Q92572 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.58□□□□□ -0.24
AP3S1Q92572 DUX4L26-201ENST00000489078 1255 ntBASIC13.58□□□□□ -0.24
AP3S1Q92572 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.58□□□□□ -0.24
AP3S1Q92572 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.58□□□□□ -0.24
AP3S1Q92572 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.58□□□□□ -0.24
AP3S1Q92572 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S1Q92572 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.58□□□□□ -0.24
AP3S1Q92572 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.58□□□□□ -0.24
AP3S1Q92572 AC107918.4-202ENST00000641623 219 ntBASIC13.58□□□□□ -0.24
AP3S1Q92572 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S1Q92572 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
AP3S1Q92572 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S1Q92572 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S1Q92572 AC023090.2-201ENST00000625182 2110 ntBASIC13.58□□□□□ -0.24
AP3S1Q92572 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S1Q92572 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S1Q92572 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S1Q92572 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.58□□□□□ -0.24
AP3S1Q92572 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S1Q92572 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S1Q92572 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S1Q92572 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S1Q92572 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.58□□□□□ -0.24
AP3S1Q92572 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.58□□□□□ -0.24
AP3S1Q92572 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S1Q92572 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
AP3S1Q92572 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
AP3S1Q92572 DGCR9-201ENST00000609630 2415 ntBASIC13.58□□□□□ -0.24
AP3S1Q92572 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
AP3S1Q92572 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.57□□□□□ -0.24
AP3S1Q92572 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
AP3S1Q92572 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.57□□□□□ -0.24
AP3S1Q92572 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.57□□□□□ -0.24
AP3S1Q92572 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.57□□□□□ -0.24
AP3S1Q92572 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
AP3S1Q92572 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
AP3S1Q92572 KRT8P37-201ENST00000451609 1420 ntBASIC13.57□□□□□ -0.24
AP3S1Q92572 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.57□□□□□ -0.24
AP3S1Q92572 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
AP3S1Q92572 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.57□□□□□ -0.24
AP3S1Q92572 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.57□□□□□ -0.24
AP3S1Q92572 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
AP3S1Q92572 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 RPS8P6-201ENST00000426177 609 ntBASIC13.57□□□□□ -0.24
AP3S1Q92572 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
AP3S1Q92572 AC025062.2-201ENST00000605477 670 ntBASIC13.57□□□□□ -0.24
AP3S1Q92572 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.57□□□□□ -0.24
AP3S1Q92572 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
AP3S1Q92572 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
AP3S1Q92572 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.57□□□□□ -0.24
AP3S1Q92572 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.57□□□□□ -0.24
AP3S1Q92572 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
AP3S1Q92572 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP3S1Q92572 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.57□□□□□ -0.24
AP3S1Q92572 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms