Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 AL356585.2-201ENST00000625078 2396 ntBASIC14.14□□□□□ -0.15
LSMEM1Q8N8F7 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 AC041040.2-201ENST00000622926 2899 ntBASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 CICP24-201ENST00000605464 2705 ntBASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 TSSK5P-201ENST00000423978 907 ntBASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 FAM8A3P-201ENST00000427218 844 ntBASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 TIMM17BP1-201ENST00000545713 516 ntBASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 KRT18P28-201ENST00000453838 1332 ntBASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LSMEM1Q8N8F7 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 AC012508.2-201ENST00000567613 1472 ntBASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 CICP23-201ENST00000605013 2741 ntBASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 MIR943-201ENST00000401286 94 ntBASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 AC139530.3-201ENST00000620344 690 ntBASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 AC004461.2-201ENST00000629517 803 ntBASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 AP000845.1-201ENST00000581677 2131 ntBASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LSMEM1Q8N8F7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms