Protein–RNA interactions for Protein: Q86WV1

SKAP1, Src kinase-associated phosphoprotein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1Q86WV1 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 MX1-218ENST00000619682 1980 ntTSL 5 BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 AC027612.4-201ENST00000605371 583 ntBASIC19.16■□□□□ 0.66
SKAP1Q86WV1 AC009093.7-201ENST00000623853 1223 ntBASIC19.16■□□□□ 0.66
SKAP1Q86WV1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 AL121723.1-201ENST00000445194 1519 ntBASIC19.15■□□□□ 0.66
SKAP1Q86WV1 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 AC011467.4-201ENST00000594891 528 ntBASIC19.15■□□□□ 0.66
SKAP1Q86WV1 SPDYE12P-201ENST00000618416 771 ntBASIC19.15■□□□□ 0.66
SKAP1Q86WV1 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 TKT-201ENST00000296289 1931 ntTSL 5 BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC19.15■□□□□ 0.66
SKAP1Q86WV1 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC19.14■□□□□ 0.65
SKAP1Q86WV1 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SKAP1Q86WV1 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC19.14■□□□□ 0.65
SKAP1Q86WV1 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SKAP1Q86WV1 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SKAP1Q86WV1 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SKAP1Q86WV1 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SKAP1Q86WV1 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SKAP1Q86WV1 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
SKAP1Q86WV1 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SKAP1Q86WV1 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SKAP1Q86WV1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.14■□□□□ 0.65
SKAP1Q86WV1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.14■□□□□ 0.65
SKAP1Q86WV1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.14■□□□□ 0.65
SKAP1Q86WV1 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.14■□□□□ 0.65
SKAP1Q86WV1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.14■□□□□ 0.65
SKAP1Q86WV1 AL033527.5-202ENST00000641632 1098 ntBASIC19.14■□□□□ 0.65
SKAP1Q86WV1 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SKAP1Q86WV1 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SKAP1Q86WV1 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC19.14■□□□□ 0.65
SKAP1Q86WV1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SKAP1Q86WV1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms