Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 SOCS2P1-201ENST00000417727 557 ntBASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 AC107373.2-201ENST00000607735 490 ntBASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RFWD3Q6PCD5 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 AC105250.1-201ENST00000509378 2057 ntBASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 AL162726.2-201ENST00000438986 1017 ntBASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 AC007389.4-201ENST00000454674 793 ntBASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 AC026410.3-201ENST00000514280 936 ntBASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFWD3Q6PCD5 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 AC008735.3-201ENST00000596646 500 ntBASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 AC025181.2-201ENST00000606994 802 ntBASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFWD3Q6PCD5 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
RFWD3Q6PCD5 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFWD3Q6PCD5 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFWD3Q6PCD5 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFWD3Q6PCD5 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.02■□□□□ 0.15
RFWD3Q6PCD5 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms