Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC11.67□□□□□ -0.54
MRPL54Q6P161 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC11.67□□□□□ -0.54
MRPL54Q6P161 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
MRPL54Q6P161 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
MRPL54Q6P161 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.67□□□□□ -0.54
MRPL54Q6P161 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC11.67□□□□□ -0.54
MRPL54Q6P161 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC11.67□□□□□ -0.54
MRPL54Q6P161 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
MRPL54Q6P161 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 ZBTB45P2-201ENST00000452245 1531 ntBASIC11.66□□□□□ -0.54
MRPL54Q6P161 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 CYP51A1P2-201ENST00000419457 1499 ntBASIC11.66□□□□□ -0.54
MRPL54Q6P161 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 POM121L3P-201ENST00000419331 1163 ntBASIC11.66□□□□□ -0.54
MRPL54Q6P161 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 NKAPP1-205ENST00000585790 367 ntBASIC11.66□□□□□ -0.54
MRPL54Q6P161 AL121672.3-201ENST00000608644 468 ntBASIC11.66□□□□□ -0.54
MRPL54Q6P161 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 AL805961.1-202ENST00000641562 540 ntBASIC11.66□□□□□ -0.54
MRPL54Q6P161 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 AL139385.1-201ENST00000611744 3272 ntBASIC11.66□□□□□ -0.54
MRPL54Q6P161 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
MRPL54Q6P161 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
MRPL54Q6P161 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL54Q6P161 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.65□□□□□ -0.54
MRPL54Q6P161 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.65□□□□□ -0.54
MRPL54Q6P161 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.65□□□□□ -0.54
MRPL54Q6P161 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL54Q6P161 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL54Q6P161 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.65□□□□□ -0.54
MRPL54Q6P161 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC11.65□□□□□ -0.54
MRPL54Q6P161 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL54Q6P161 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
MRPL54Q6P161 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC11.65□□□□□ -0.54
MRPL54Q6P161 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL54Q6P161 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL54Q6P161 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC11.65□□□□□ -0.54
MRPL54Q6P161 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC11.65□□□□□ -0.54
MRPL54Q6P161 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL54Q6P161 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL54Q6P161 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL54Q6P161 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms