Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NIPAL1Q6NVV3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 AL109954.1-202ENST00000564051 2148 ntBASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 RPL5P21-201ENST00000404620 815 ntBASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 UGT1A2P-201ENST00000454886 866 ntBASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 SERBP1P5-201ENST00000510079 1181 ntBASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 RN7SL204P-201ENST00000582831 262 ntBASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 AC027307.3-201ENST00000594262 1100 ntBASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 LINC01115-203ENST00000606068 577 ntBASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 CICP23-201ENST00000605013 2741 ntBASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 AC009090.5-201ENST00000624886 2285 ntBASIC14.89□□□□□ -0.03
NIPAL1Q6NVV3 AC005912.2-201ENST00000619492 2400 ntBASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 SPDYE19P-201ENST00000338590 713 ntBASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 RPL13AP25-201ENST00000484130 612 ntBASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 AC015910.1-201ENST00000579400 975 ntBASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NIPAL1Q6NVV3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms