Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 AC068418.2-201ENST00000577309 3703 ntBASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 C1QBPP1-201ENST00000400117 770 ntBASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 DUX4L47-201ENST00000566374 394 ntBASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 AC004233.3-201ENST00000607794 1269 ntBASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 BX539320.1-201ENST00000623759 877 ntBASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 AC023090.2-201ENST00000625182 2110 ntBASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RSPO1Q2MKA7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 AC005912.2-201ENST00000619492 2400 ntBASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 AL139094.1-201ENST00000405549 1188 ntBASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 AC087499.6-201ENST00000411576 835 ntBASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 NUS1P3-201ENST00000423502 862 ntBASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 AC007431.3-201ENST00000623221 587 ntBASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.23□□□□□ -0.29
RSPO1Q2MKA7 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms