Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 AC126915.1-201ENST00000522847 1038 ntBASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 ZACNP1-201ENST00000612259 710 ntBASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 AC244452.3-201ENST00000636814 210 ntBASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 AP000845.1-201ENST00000581677 2131 ntBASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.74■□□□□ 0.43
SHROOM1Q2M3G4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 FKBP4P6-201ENST00000457486 1332 ntBASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 AC011840.2-201ENST00000563063 1520 ntBASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 GHSR-202ENST00000427970 912 ntBASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 CHMP4BP1-201ENST00000556017 588 ntBASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 AC020914.3-201ENST00000594712 304 ntBASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 AL358472.3-201ENST00000608147 415 ntBASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.73■□□□□ 0.43
SHROOM1Q2M3G4 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 C18orf15-201ENST00000623680 2534 ntBASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 AC020658.6-201ENST00000623564 1870 ntBASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 AL354877.1-201ENST00000424412 413 ntBASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 FTLP10-202ENST00000505798 471 ntBASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 AC105129.2-201ENST00000559536 390 ntBASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 AC022748.3-201ENST00000621828 275 ntBASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 AC007950.2-201ENST00000615045 2347 ntBASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms