Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC27Q2M243 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC27Q2M243 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC27Q2M243 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC27Q2M243 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC27Q2M243 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCDC27Q2M243 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC27Q2M243 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC27Q2M243 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC27Q2M243 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC27Q2M243 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CCDC27Q2M243 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC27Q2M243 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC27Q2M243 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC27Q2M243 TMEM14DP-201ENST00000422205 345 ntBASIC19.87■□□□□ 0.77
CCDC27Q2M243 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC27Q2M243 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC27Q2M243 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC27Q2M243 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC27Q2M243 SLC25A47P1-201ENST00000531577 414 ntBASIC19.87■□□□□ 0.77
CCDC27Q2M243 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC27Q2M243 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC27Q2M243 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
CCDC27Q2M243 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC27Q2M243 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC27Q2M243 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC27Q2M243 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC27Q2M243 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CCDC27Q2M243 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC27Q2M243 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CCDC27Q2M243 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC27Q2M243 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC27Q2M243 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC27Q2M243 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC27Q2M243 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC27Q2M243 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC27Q2M243 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC27Q2M243 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC27Q2M243 TTTY23B-201ENST00000442790 549 ntBASIC19.86■□□□□ 0.77
CCDC27Q2M243 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC27Q2M243 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC27Q2M243 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.86■□□□□ 0.77
CCDC27Q2M243 AC106760.1-201ENST00000508690 800 ntBASIC19.86■□□□□ 0.77
CCDC27Q2M243 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC27Q2M243 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CCDC27Q2M243 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.86■□□□□ 0.77
CCDC27Q2M243 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC27Q2M243 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC19.86■□□□□ 0.77
CCDC27Q2M243 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC27Q2M243 AC145423.3-201ENST00000615987 467 ntBASIC19.86■□□□□ 0.77
CCDC27Q2M243 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CCDC27Q2M243 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC27Q2M243 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 FGD5P1-202ENST00000614866 2498 ntBASIC19.86■□□□□ 0.77
CCDC27Q2M243 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
CCDC27Q2M243 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC27Q2M243 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CCDC27Q2M243 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC27Q2M243 AC055811.4-201ENST00000624039 1754 ntBASIC19.85■□□□□ 0.77
CCDC27Q2M243 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC27Q2M243 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC27Q2M243 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC27Q2M243 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCDC27Q2M243 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC27Q2M243 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC27Q2M243 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC27Q2M243 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC27Q2M243 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC27Q2M243 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC27Q2M243 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CCDC27Q2M243 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
CCDC27Q2M243 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC27Q2M243 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC27Q2M243 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CCDC27Q2M243 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms